Oncorhynchus nerka (sockeye salmon): 115135925
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Entry
115135925 CDS
T07952
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115135925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115135925
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115135925
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Ortholog
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
115135925
NCBI-ProteinID:
XP_029527004
LinkDB
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Position
LG10:49528261..49550131
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AA seq
805 aa
AA seq
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MSKSKGPEYPSFSLETDDRTDDERAQSRQVKKPDRLVSALGLGSSGGPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLEENKEDRDSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRNGRNNTIEYLLDISEKMGDIKELVNAAYTDSYYKGQ
TALHIAIERRSTYFVELLIKKGANVHAKACGKFFQLNDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYQRVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTAARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRNLSRKFTEWVYGPVHSSLYD
LDSLDSYEKNSVLEIIVYSSDIPNRHEMLQIEPLNRLLEEKWAKFAARMFFLNFMVYLVY
LSVFTAVAYYRKKGTPPFTLEHTRQEYLRLAGQLFITVGACYFFIRGILDLKRKRPSLDT
LLIDGYSEILFFFLQAIFFLASSVLYCCGREEYLGFFVLCLALSWVNLLYFSRGYRHMGI
YSVMIQKMILCDILRFLFVYVTFLFGFSAAVVTLLMEPDLPANNTAQPIDSTDGRGRTFF
LPTEDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLL
NMLIALMSRTVEKMSLESTSIWKLQRALTILDLERSLPRCLRRRLRSGVDKDLGTRAGEK
DRRWCFRVEEVNWNKWNTNLGIINEDPGSGDTSKLSPTHSSRTLGRERSWRGFLGNVSRR
QHTQPQQQTQVESTEMSSLSPLNHV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcaaagggcccagagtacccttccttctctctggagacggatgacaggaca
gatgatgagagggcacagagcagacaggtgaagaagcctgaccggctggtgtctgcccta
ggcttaggcagttcgggggggcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaagaagtacgatgtttg
gaggagaacaaagaggacagggacagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgatgtcatgaagctggaggggctgcatcagtacttgcatcagtccatg
aaaaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaatggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggggacatcaaagaattagtaaatgctgcatacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcacctattttgttgagctattgatcaag
aaaggagcaaacgtccatgccaaagcctgtgggaaattcttccagctcaatgatggaccc
agcttctactttggtgagctacctctgtccctggctgcgtgcaccaaccagcctgaggtg
gtggactttctgctggagaatgactaccagagagtggatgtgagggagagtgattctctg
ggtaacatggtgttgcatgccctggtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtacgaccacatcctgacaacagctgcccgcctccaccccaaatgg
aggctggaggacatcgagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
aacctgtcccgtaaattcactgagtgggtttacggacccgtccactcctccctgtatgac
ctggactcactggactcctacgagaagaactctgtcctggagatcatcgtttacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggccaagtttgctgctcggatgtttttcttaaacttcatggtttacctggtttac
ctctccgtcttcaccgctgtcgcctactacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcagctttttataactgtgggagcc
tgctatttcttcataagagggatattagacttgaagaggaaacgtccaagcctggacact
ttgctgattgacggatacagtgaaatcctttttttttttctgcaggcgatcttcttcctg
gcctcctcagtgctgtactgctgtggtagggaggagtacctgggtttttttgtgctgtgt
ctggctctcagctgggtcaacctgctctacttctccaggggatacagacacatgggcatc
tacagtgtcatgatacagaagatgatcctatgtgatatcttgcgctttctctttgtctac
gttaccttcctctttgggttttcagcagcggtggtcactttgttgatggaacctgatttg
ccagccaataatacagcacagccaatagacagtacagatggaagaggtcgtacctttttc
cttcccactgaggattcgtgtataaaacccaccttcaggaacatctctcacactatcatg
gagctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtac
aaggaagtgttttacatgctgctaatctcctacatcgtgctcacctacatcctgctgctc
aacatgctcatcgccctcatgagccgcactgtggagaagatgtccctggagagcaccagc
atctggaaactacagcgggccctcaccatcctggatctggaaaggagcctgcctcgctgc
ttgagaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaa
gaccgccgatggtgcttcagagtggaggaagtcaactggaacaaatggaacaccaacctg
ggaataatcaatgaggatccagggagcggagatacgtccaagctgtcccctacacacagc
agcagaacgctaggcagagagaggagctggcgggggttcctgggaaatgtcagtcgaaga
caacatacacagcctcagcaacaaacacaagtagagagcacagagatgtcctctctgtct
cctctcaaccatgtctga
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