Oncorhynchus nerka (sockeye salmon): 115135934
Help
Entry
115135934 CDS
T07952
Name
(RefSeq) CCR4-NOT transcription complex subunit 8-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115135934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135934
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115135934
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115135934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
EKR
Motif
Other DBs
NCBI-GeneID:
115135934
NCBI-ProteinID:
XP_029527024
LinkDB
All DBs
Position
LG10:50027643..50035770
Genome browser
AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVDEEMRKIRQIIQSYNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLSFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQNQNGISSSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgcactggcagataccagtcagattatctgtgaggtctgggcaagcaatgtg
gatgaggaaatgaggaaaatccgacagataattcaaagctacaacttcattgccatggac
acagaattccccggagtggtggttcgacccattggcgagtttcgcagtacggtagactac
cagtaccagctcttgaggtgcaacgtggaccttctgaaaatcatccaactgggactgtca
tttatgaacgaggatggagactatccccctggaacgacgacatggcagttcaatttcaaa
tttaatttaacagaggatatgtactcccaggactcgatagacttacttcagaactccggc
ctccaattcaaaaagcacgaggaagaggggattgacacactctactttgctgagctcctg
atgacatccggtttagtgctgtgtgaaaatgtcaagtggctctcctttcacagcgggtac
gattttggctacctggtgaagctattaacagatactcggctacctgaggaggaacatgag
ttcttccagatcctcaatctcttcttccctgcaatctatgatgtcaaatatctgatgaag
agctgcaaaaacttgaagggaggactccaggaggtggctgaccagctggaactaaagagg
atcgggagacaacaccaggccggttcggattcgctgctcacagggatggccttctttagg
atgaaagagcttttctttgaagacaacattgatgacgcaaagtattgtgggcgattgtat
ggattgggctctgggtccactcaaaatcagaacggcatctcaagctcttcccaagaggaa
accaacaacaagcactga
DBGET
integrated database retrieval system
