Oncorhynchus nerka (sockeye salmon): 115135969
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Entry
115135969 CDS
T07952
Name
(RefSeq) AP-1 complex subunit beta-1-like isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115135969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135969
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
115135969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
Cnd3
HEAT_EZ
NELF-A_N
Arm_2
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
115135969
NCBI-ProteinID:
XP_029527101
LinkDB
All DBs
Position
LG10:complement(52332927..52414834)
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AA seq
952 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKELDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAVPIEQAQSVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAALSSGLNDLFELSTGMAISTG
GYVTPKSVWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYYSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatctttgagctgaaggca
gagctgaacaatgagaagaaagagaagaggaaggaggcagtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagatgtggtgaactgcatgcagact
gacaacctggagctgaaaaagctggtctacctgtacctgatgaactacgccaagagccag
cccgacatggccatcatggctgtcaacagctttgtcaaggactgtgaggaccctaacccc
ctgatccgtgccctggctgtgcgcaccatgggctgcatccgcgtggacaagattacagag
tacctgtgtgagccgctgagaaagtgtctgaaggacgaggacccatacgtgagaaagaca
gcagcagtgtgcgtggcaaagctccacgacatcaacgcccagatggtggaggaccagggt
ttcctggactccctcagggatctcattgccgactccaaccccatggtggtggccaatgcg
gtggcagctctgtctgagattagtgagtcccaccccaacagcaacctgctggacctcaac
ccacagaacatcaacaagctgctgacagccctcaacgagtgcacagagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgggtcacgccccgtctctcccacgccaactcggcggtggtgctgtcggctgtc
aaggtgctgatgaagttcctggaactgctacccaaggagttggactactacaacaccctg
ctgaagaagctgtcccccccgctggtcacccttctctctggggagccagaggtccagtat
gtggccctcaggaatatcaacctcatcgtccagaaaaggcctgagatccttaagcaggag
atcaaggtgttctttgtcaagtacaacgaccccatctacgtcaaactggagaaactggac
atcatgattcgcctggcctcccaggccaacatagctcaggtgttggctgagctgaaggag
tatgccaccgaggtagacgttgactttgtgcgtaaggcagtgagggccatcggacgctgt
gccatcaaagtggagcaatctgctgagcgctgtgttagcaccctgctagacctcatccag
accaaggtcaactatgtggtgcaggaggccatcgtggtcatcagggacatcttccgcaaa
taccccaacaagtatgaaagcatcatcgccacgctgtgtgagaacctggattctctggat
gagccggatgcgcgtgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgccgacgagctgctggagagcttcctggagggcttccatgacgagagcacgcaggtc
cagctcactcttctcacagccatcgtcaagcttttcctcaagaagccctctgagactcag
gagctggtgcagcaggtcctcagtctggccacacaggactccgacaaccctgatctgcgt
gacaggggttacatctactggcgcctgctgtccaccgatccggtaacggccaaggaggtg
gtcttgtccgaaaagcccctgatctcggaggagacagacctgattgagcccaccctgctg
gacgagctcatttgccacattggctccctagcctccgtctaccacaagccccccaacgcc
ttcgtggagggcagccatggcatccatcgcaagcacctgcccatccagcacggcagcatt
gacacaggcgagagccctgtgagcgcagggccagcggtccctattgaacaggcccagtca
gtcatcccttcccagggagacctgctgggagacctgctcaacctggacctgggtcccccc
gtcaatgtgccccaggtctcctccatgcagatgggcgctgtcgacttgctgggcggaggc
ctcgacagcctgctcggtggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaactttattccctcatcagttcccaacacgttcgccccatcgccgactcctgcagcg
ctcagcagcggcctcaacgacctgtttgagctctccacaggcatggccatctccacagga
ggctatgttacccccaaatctgtatggctgcctgcagtgaaagctaaaggactggagatc
tcaggcacattctcccgccgacagggccaaatgtacatggacatgacctttaccaacaag
gccttgcagcacatgaccgacttcgctatccagttcaacaagaacagtttcggagtgatc
cccaccacccctctgcccatccacactccactgatgcccagccagagtattgaagtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaacctacaggtg
gctgtgaagaacaacattgacgttttctacttcagcgggcttatcccactcaacatcttc
ttcgtggaggatggcaaaatggagcgacaggtgttcttggccacctggaaagacatcccc
aatgagaacgagctgcagtaccagattaaggagtgccacttaaatgcagacacggtgtcg
gggaagctgcagaacgacaacatctacaccatcgccaagaggaacgtggagggccaggat
atgctctaccagtccctcaagctcaccaatggcatctggatcctggctgagctccgcatc
caacccggcaaccccaactacacactgtccttgaagtgccgggctcctgaggttacccag
tatgtctaccaggtgtactactcagtcctgaagaactga
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