Oncorhynchus nerka (sockeye salmon): 115135974
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Entry
115135974 CDS
T07952
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115135974 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115135974 (lrwd1)
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
Beta-prop_EML_2
LRR_4
WD40
WD40_CDC20-Fz
LRR_8
LRR_9
WD40_WDHD1_1st
LRR_At5g56370
WD40_Prp19
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
LRR_14
Motif
Other DBs
NCBI-GeneID:
115135974
NCBI-ProteinID:
XP_029527114
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Position
LG10:complement(52472908..52483748)
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AA seq
795 aa
AA seq
DB search
MAALWLLPDGTLMKAHMTGLSIISRESYRGSTVLCEHYKHRESSPLDMGKISEKLLLEKC
TPKNTNLEEVKTLNLSKLGLKSSDLPVPLLSRLRCLEQLDLSGNRLQGMPSGLVLPSLRS
LDLTNNEMEDVTTLDTLTTLEDLRMEDNLYITVNDNYKLIILLPKLRFYNGKDISNTANH
VRYANSENLRKRVLALWETSFSLPDHRTAEKLAIVERDFVSAVRHKVKYGPSSLTDYTKW
RVEMIAKEHLRSLTEPNEEYRDAEEPADTKKNCNFPFPAKRKRSVSAVKCDVTLNPQKIA
RASVQAEDSPHGSSRLQSIPHKAERPISTTPRTHKAAQIPATPIRGQSKLLVTPRNGLRE
KQHQSKEDMPLAKRTRKSARQQRSTEVNETPGKVICTKSPHSSQEPVSLQPLHVLQCHSK
QDSPDDFSTQLWACSFQPPLDYNGDVNGATRIVATCGGESVCLIDCETGLVMKKYKVPGE
EFFSLAWSTVLMSRKGNVCMRPCSILAAGGKRGLVKLLHPRANMAYGEFRASRKALSILC
FSPRQGNLLFTGSYDKNILLWDIGGVDSDYNFKVTQLLVLETTSTPLHFCLPPATPDTHL
IAACEKGLHSYNIQLNKDPKKRSEEMEITFPVYDKDHDYHTIDGLGFLTNNVVASKSHMQ
GSIYLWSWNDTRAQRLNKKKKKKEVCAVILVELQWSSTDIPYLSLNTCPSKGYVVCGDER
GRLWTYHVTDLKANFRSGKAIPATEILAWPLPVRNGQGPVEGPPINSVAMDPELRYLVAL
SDKNMAVVWIRTESS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctctggctcttaccggatggaacgttgatgaaagcccatatgactggcttg
tcaattatttcgagggaaagttacagaggttctactgtgctctgcgagcattacaaacac
cgggaatcttcccctttagacatggggaaaatatcagagaaactactgctggagaaatgc
actccaaaaaacaccaacctggaagaagtaaagacactaaatctctccaagctcggtctg
aagagcagtgacctgcctgtccccctgctttctcgccttcgctgtctggaacagttggac
ctgtctgggaacagacttcaggggatgccctccgggctagtcctgccctccctacgctct
ctggacctgaccaacaatgagatggaagatgtcaccactctggacacactgaccaccctg
gaggatctgaggatggaggacaacctctacatcactgtcaatgacaactacaagctgata
atcctcctgcccaagttgaggttttacaatgggaaggatatcagcaatacagccaaccac
gtacgctatgccaacagtgagaacctcaggaagagggtgttagcgctgtgggagaccagc
ttttcactccctgaccaccgaacagcagagaaactagccattgtggagagggattttgtc
agtgcggtgcgtcataaggtgaaatatggccccagctctctgaccgactacacaaaatgg
agggtggagatgatagctaaagagcaccttcgctctttgaccgagccaaatgaagagtac
agagatgcagaggagcctgctgatacaaagaagaactgtaattttcctttcccagccaag
aggaagcgttccgtctcggctgtcaaatgcgacgtaaccctaaaccctcagaaaatagcc
agagcgagtgttcaagccgaggacagcccacacgggtcaagccgtctgcaaagcatccct
cataaggcagagcggcccatcagcaccacgccaaggacccataaggcagcacagatccca
gccacccccattaggggccagtccaaactcctggtgacccccaggaatggcctgagagag
aagcaacatcagtccaaagaagacatgccactggccaaacggactcgcaagtctgccagg
caacagcggtccacagaggtcaacgagacacctgggaaagtaatctgcaccaagtctccg
cattcatcacaggagccagtgagtctgcagcctcttcacgtcctgcagtgtcacagtaaa
caggacagccctgatgactttagcacccagctgtgggcctgttccttccagcccccgcta
gactacaatggagatgtgaatggtgcgactcgtattgtggcaacgtgtggaggagagtct
gtgtgcctgatcgactgtgagacgggactggttatgaagaagtataaggtccctggtgag
gagttcttctctctggcatggtcaactgtgctgatgtcacggaagggaaacgtttgcatg
cgaccctgcagtatcttggcggcaggggggaagcgaggcttggtgaaactgcttcacccc
agagccaacatggcatacggagagttcagagccagccgcaaagccctctccatcctctgc
ttcagtccccgccagggcaacttgctcttcactgggtcgtacgataaaaatatattattg
tgggacattggcggagtggacagcgactacaatttcaaagtcactcagctgttggtgttg
gagaccacctccacacccctgcacttctgcctaccccctgccaccccagacacacacctc
atcgctgcctgtgagaaggggctgcacagctacaacatccagctcaacaaagaccccaag
aaaaggtctgaggagatggagatcacattccctgtgtatgacaaggaccatgactaccac
accattgatggcttgggattcctcacaaacaatgtcgtcgcctctaagagccacatgcag
ggctcgatctacctgtggagctggaacgacacgcgagcccagcggctcaataagaagaag
aagaagaaggaggtatgtgctgtgatcctggtggagctgcagtggtccagcacggacatc
ccctacctgtccctcaacacctgccccagtaaaggctatgtggtgtgtggtgacgaaaga
gggagactgtggacgtaccatgtaacagacctcaaggccaactttaggagtggcaaagca
attcctgccacagagatcctggcatggccgttacctgtgaggaatggacagggcccagtg
gaaggtccccctatcaacagtgtggccatggaccctgagctcagatacctggtggccctc
agcgacaagaacatggcagtggtgtggataagaacagagtcttcctga
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