Oncorhynchus nerka (sockeye salmon): 115135981
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Entry
115135981 CDS
T07952
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115135981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135981
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115135981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
115135981
NCBI-ProteinID:
XP_029527124
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All DBs
Position
LG10:complement(52802820..52811601)
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AA seq
1170 aa
AA seq
DB search
MSPREKRFIAFSSLVFCSIVIFCLVVYYIPTFFYIVFILGVCCVACIYYSGESLNARLGP
HPRHGLTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVFTDQRRSESAIYRKVAG
QSDSFLFSPRDILMGSYIGKAESPPSVVGRPRAGANSRVNPNAREQLREILARPNHAVYT
PNKRLSFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDSFKKKNILIPRNSPA
VHSPVTVKIARPDRNTSQSPFFDHLNSPGILGSPDLGAPADPCSRETVLSVLKESRKREV
DNEDDMSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPTQPVPKPGTLKRGLNAMTEESM
MKKSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPGSSR
SLTPERASKKPREEDARSPSSASSTRSNKTLMDPAPTTEKLTLAPEVHVASDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECVPEKSVPAPVV
TTSSQPPVSIDPTPTLATLLASPLSISTSASVVAPISVINLDPVPSSTAAPVTTTPAANP
LLESLKMMRNNSLASAAATTAAPAVSLVKVLMTPAPLVTSALEAETSLTAPQPTPASSFQ
PASTSLSQPASTMSSAFIQVLGQVTKAPSSVPSLGGASLFGLANTLTAPFSSLAPTATTE
TTSSNNPLLASVFKPIFGPATPASPATESTPAVPTFKPIFGSATATSAFGQPAATSAPST
ASASASLLSGLTNSSTVAPAASLFTGVSSSTAHAPVPSAVPAAPPSVKSLFGNWSAPPAM
TSATTIAPATGSTFQFGSTTAPAPTLSSTAAATTSNNSFSFGAMTTTSAATQLAPPATAQ
GGFTFGQAAATQNSTTASFSGFGMATAVTTTAAAPAIQSTFTFGKSSFDASTASAFPSAT
QAPAAGSAAANPFTFGSAGATPAPFAFGAAATTAASTFGTATKLAFGASSTGFAFGNTVA
VPAAPAFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFGAAISGTQFGTP
NLTTQTPGFNFGAAVSDKPAFGTSTPTFGQSTAAGPIAFGSPGTPVQGFSALAPSSFGSP
STPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcatagcgtttagctctctcgtgttttgttctatcgta
atattctgtctagttgtgtattatattccaaccttcttttatatagttttcattcttgga
gtttgttgcgttgcctgtatttattacagcggagaatcactcaacgctaggttaggccct
catccacgccatggtctgactattccacccgtgctgcgacgctggttgccagagattgcg
aacggattacccacagcggggagagtcagaagtcgcacggtcaagggtgatgttagggaa
ccgctagtatttaccgaccaaagacgttccgagagcgctatttatcggaaagtcgcagga
caaagcgactcatttctgttcagtcctcgggatatactaatgggaagttacattgggaag
gcagaaagtcctccctcagttgttgggaggccgcgagccggtgcgaattcgcgtgttaac
ccaaacgcacgagaacaactgcgcgaaatattggcgcgacccaaccacgctgtttatact
ccgaacaaaagactgtcatttgggagggagccccttggcatgatgggcaggttcaccata
actccccaacgccactaccccctccagcagaccggcacatcctctgtgggcatcctgcca
cctgcccagtgggacagcttcaaaaagaagaacattctcatccctcgaaactccccagca
gtccacagtccagtcacagtgaagattgctaggccagatcgcaacacctctcaatcccct
ttctttgatcatttgaactccccgggaatccttggttctccagacctgggggcccctgca
gacccttgctccagggagactgttctgagcgtgctcaaagagagccgcaagagagaggtg
gacaatgaagatgacatgagcttcactgcagggcaaaagagcaaaaggaggcgtcatgac
agcagtgggagtgctcactcggcatttgagccactgctgcccaatggggctcctacacag
ccggtgcccaagcctggtacgctgaagcgaggactgaacgctatgactgaggagtcaatg
atgaagaagtcgcgcacctcctccatcagttctgtgagctgtggcctgacccccagcggc
accctgggctcggtccgcaactccatccgcagctccctcagctcctcacagggctttgct
cagcggaaaaaggcctccacccgcagcctctcccctctctccagccctgggtcatcccgc
tccctgaccccagagagagcctctaaaaagcccagggaagaggatgctcgctcccccagc
tctgcatcctcgacaaggtctaacaagacgttgatggacccagcacccaccactgaaaaa
ctgactctagccccagaggtccatgtggcgtcagactctgccggtagtgggaaacggaaa
cgcaagattccgctggtgtccagtcgtagaggagaccaaatctctctacctccacctcct
gagctgggctacaccatcactgtgaaagacctggatcaggagaaaaaagctgctctcagc
cagatcaacacagtcctcgaagagtgtgtaccagagaaatctgtgccagctccagtagtg
accacatcttctcaacctcctgtgtcaattgaccccacacccaccctggccaccctgctg
gccagccctctttccatatcgacatctgccagtgtggtggctcctatctctgtgatcaac
ctggatcctgtcccctcaagcacagctgcacctgtcaccaccacccccgcggccaacccc
ctcctggagtctcttaaaatgatgaggaacaactccctcgccagtgctgctgccaccact
gcagctccggctgtctccttggtgaaagtattgatgactcctgcaccactggtgacttct
gctctggaggcagagaccagcttgactgctcctcagcccacaccagcctcctccttccag
cctgcctcaacctccctctcccagcctgccagcaccatgtcctctgctttcatccaggtg
ctgggccaagtcaccaaggcccccagcagtgtccccagcctgggtggagctagcttgttt
ggcctggccaacacactgacagcccctttctcctcactggcccccaccgccaccacagaa
acaaccagcagtaataatcccctcctggcctctgtgttcaagcccatcttcgggcctgcg
accccagcctccccagccacagagagcacacctgctgtcccaacctttaagcccatattt
ggaagtgccacagccaccagtgcttttggacagccagccgctacctcagccccctccaca
gccagcgcatctgcttcattgctcagcgggctcaccaacagcagtacagtggcccctgct
gcctccctgttcactggggtgtccagcagcaccgctcatgccccagtcccctccgcagtc
ccagccgccccgccatctgtcaagtctctgtttggaaactggagtgcgccgcctgcaatg
acctctgccacgaccattgcccctgccacaggaagtactttccagttcggctccaccaca
gctcctgcacccaccctcagctccactgcagccgccaccactagcaacaacagcttttcg
tttggtgccatgaccaccacctctgctgccactcaactcgcccccccagccaccgcccag
gggggatttacctttggccaggctgcagccacccaaaactctaccaccgcatccttcagt
ggctttggcatggccactgcagtcactactactgctgcagcacctgcaatccagtccacg
ttcacgtttgggaagtcatcattcgacgcctccacagcatcagcgttccctagtgcgacc
caggccccggctgctggttccgcagcagctaatcctttcacgtttgggtcagctggggcc
acccctgcccccttcgcttttggtgcagctgccactacggcagcttctacatttgggacc
gccactaagctggcatttggagccagctctacaggttttgcatttggcaacactgtggct
gtcccagcagcccctgcctttggctctgccactcagactgccggcacactcccagcctct
gccccaaccttttcgtttggtggtgtgtctgcacagcaggcccccgctacccctgtccag
ccaaccaccggaggattcaacttcggcgcagcaatttcaggcactcagtttggaacaccc
aacctcacaacacagacaccaggcttcaacttcggggctgctgttagtgacaagccagcc
ttcgggacgtctacccctacttttggccagagcacagctgcaggtcctatcgcctttgga
agcccaggaactccagtccaaggattcagtgctttggcaccctcatcattcggctctcca
tcaactccctcgttctccattggtgctggctccaaaacatcaggggcacgccagaggcta
caggcccgaaggcagcaccccaggaagaaatag
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