Oncorhynchus nerka (sockeye salmon): 115135982
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Entry
115135982 CDS
T07952
Name
(RefSeq) transducin beta-like protein 2
KO
K23325
transducin beta-like protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
one03012
]
115135982
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115135982
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
DUF7165
DUF2500
PG_binding_5
DUF4006
Motif
Other DBs
NCBI-GeneID:
115135982
NCBI-ProteinID:
XP_029527125
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Position
LG10:complement(52789648..52795283)
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AA seq
440 aa
AA seq
DB search
MEFAALIALTVLIGMLIILVAIAVGKQKGEISDQLEQKEEDSVAEESAVKASTAKKQKQQ
RPRKEKAQQQTFSHPLLASSLKSHSGNVTSLDFSSNGKYLATCADDRTVRIWSTKDFLDR
DHKCLRANVELDHATLVRFSPDSKAFITWLANGDTIRIFKMTKKDDGSFTFKAAPEDFPQ
KHKTNVINIGIAETGKFIMSASTDTNILIWDLKGEVLASVITNQMTNSYAAISPCGRFVA
SCGFTPDVKVWEVCFGKCGEFKEVARAFDLKGHSAGVHSFAFSNDSRRMATVSKDGTWRL
WDTDVEYKKQQDPYLLKSVPCQSSEGSRVALSPDARVVAISNSCSVAMYSTSTGQLEEEF
HGVHSEEITDLRFDINSRYLVCSGDRAVRVFHNAPGYRAAIQDMQAMLKKAQNEGMKQRL
KQQIQEAQSALDTVLTAPKD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgctgctcttattgccttgaccgtattaataggaatgctgatcattttggtc
gcaatcgctgtgggaaagcagaaaggagaaataagtgatcaactagagcagaaagaagag
gactcggttgcagaggaaagtgcagtgaaggcttccactgccaagaaacagaaacaacag
cgtcctcgcaaggagaaagcccagcagcaaaccttcagccatcctctcctggcatcctcc
ttgaagagtcacagtggcaatgtgacgtccctggacttcagcagcaacgggaagtaccta
gctacttgtgctgatgaccgcactgtcaggatatggagtaccaaggacttcctggacaga
gaccataaatgtctgagggccaacgtagagctggaccacgccacgctggtccgcttcagc
cctgactcaaaggccttcattacttggctggctaacggagatactattcgcatcttcaag
atgaccaagaaggatgatggtagcttcactttcaaagctgcccctgaagacttccctcag
aaacacaagaccaatgtcatcaacatcggcatcgcagagacgggcaagttcatcatgagt
gcctccactgacaccaacatcctcatctgggacctgaaaggagaggtactggcctctgtc
atcaccaaccagatgaccaactcctacgctgccatctcaccatgtggcaggtttgttgcc
tcctgtggcttcactcctgacgtgaaggtgtgggaggtgtgcttcgggaagtgtggcgag
ttcaaagaggtggcccgcgccttcgacctaaagggccattcagctggagtccactccttt
gcgttctctaacgactcacgcagaatggccactgtgtccaaggatggcacatggcgactg
tgggacacggatgtggagtacaagaagcaacaggacccctacctactgaagtcagtgcct
tgccagtcgtcggagggaagccgtgtggccctgtcgccggacgctcgcgtggtggccatc
tccaacagctgcagcgtggccatgtacagcacctccacgggtcagctggaggaggagttc
cacggagtccacagcgaggagatcactgatctgaggtttgacatcaacagccgctacctg
gtgtgcagcggggaccgggcggtacgtgtgttccacaatgcgccgggctaccgtgcggcc
atccaggacatgcaagccatgctgaagaaggcccagaacgagggcatgaaacaaaggcta
aaacagcagatacaggaggcgcagagcgcgctggacactgtgctcacagcacccaaggat
taa
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