Oncorhynchus nerka (sockeye salmon): 115136001
Help
Entry
115136001 CDS
T07952
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A-like isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115136001
04121 Ubiquitin system [BR:
one04121
]
115136001
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115136001
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115136001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf_UBZ
zf-C2H2_8
Endonuclease_7
MIX
zf-C2H2_2
zf-MYST
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
115136001
NCBI-ProteinID:
XP_029527153
EnsemblRapid:
ENSONEG00000003623
LinkDB
All DBs
Position
LG10:complement(53289593..53458724)
Genome browser
AA seq
668 aa
AA seq
DB search
MDLTKMGMIQLQNPNHPTALLKKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEVNMNEEGTEEDDERNCRQGGKNAKKHSMEGSYHSAVQQASALASMV
DQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTQGNSHHQLMTEIKTEMM
QVDEGGGHGSPRTMESSASSNGKRSSELDKNRDGPGTPTRSSVITSARELHYVREDGMGD
SQADGGQMGLEAMAGMTGMTEKHLASLYSLPTNHKNETMLSMPASMATSLHLSPALAMSM
DFSAYGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLH
SGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTGS
DMAIFCLLCGKRFQAQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHP
YECEFCGSCFRDENTLKGHKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECK
LCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHRPEDIPPDWRIEK
TYLYLCYV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaaaatgggtatgatccagctccagaaccctaaccaccccacggccctg
ctgaagaaggctaaccagatgcgtctggcaggaaccctctgcgatgtggtcatcatggtg
gacagccaggagttccatgctcatcggaccgtgctggcctgcaccagcaagatgtttgag
atcctgtttcaccgcaacagccagcattacaccctggactttctttcaccaaagaccttc
cagcagatactggagtatgcctacactgccacactccaggccaaagtggaagacctggat
gacctactgtacgcagcagagatcctggaaattgagtacctggaggagcaatgcctcaag
atcctggagacaatccagtcctcagacgacaacgacacggaggtcaacatgaacgaggaa
ggcacggaggaagacgatgagcgcaattgcaggcaaggagggaagaacgccaagaagcat
tccatggaggggagctaccattcagccgtccagcaagcctcggccctggccagtatggtg
gaccagagcccctcggtttccacatccttcgggctttccaccatgagcccaaccaaagct
gccgtggacagcctgatgagcataggccagtccctcctgcagcagggctttgggggcgag
cacctgactcaaggaaactcccaccaccaattgatgaccgagatcaagactgagatgatg
caagtggatgaaggtggaggccatgggagccccagaaccatggagtccagcgcctccagc
aatggcaaaaggagcagcgagttggacaagaaccgcgatggccccgggactccaaccagg
agcagtgtgatcacgagcgcccgcgagctgcactacgtccgggaggatggcatgggcgac
tcccaagcagatggcggccaaatgggtctagaagccatggcgggtatgaccggcatgacc
gagaaacacctggcctccttgtactcgctgcctaccaatcataaaaatgagaccatgcta
tccatgccggcctccatggccacttctctccatctgtcccctgccctggccatgtccatg
gacttcagtgcctacgggggacttctgccccagagcttcatccagagggagttcttcaac
aagttgggggagctggctgccggtatgaagccagacggtaggaaccagcatgaacgctgc
aacgtgtgtggcgcagagctaccagacaacgaagctgtggagcaacataggaagctgcac
agcggaatgaagacctatggatgtgagctttgtgggaaacgctttctggacagcctacgc
cttaggatgcacttgctgtctcactccgctggtgagaaggccattgtctgtgaccagtgt
ggggcccagttccagaaggaggatgctctggaggctcacagacagatccacacaggctcg
gacatggccatcttctgcctgctgtgtgggaagcgcttccaggcgcagccggcactgcag
cagcacatggaggtccacgccggtgtgcgcagctacatctgcagcgagtgcaaccgcacc
ttccccagccatacggcactcaaacgtcaccttcgctcgcacacagcaggtgaccatcca
tatgagtgcgagttctgtgggagctgcttccgtgacgagaacactctgaagggccacaag
cgcatccacaccggggaaaagccctatgaatgtaacggctgtgggaagaggttcagcctc
aagcaccagctggagacccactaccgcgtgcacacaggtgagaagccgtttgagtgcaag
ctgtgccaccagcgatccagggactactcggccatgataaaacacctgcgcacccacaac
ggtgcctcgccgtaccaatgcaccatctgcctggagtactgccccagcctctcagccatg
cagaagcacatgaagggccacaggcccgaagacatccccccggactggaggatagagaag
acctacttgtacctctgctacgtctga
DBGET
integrated database retrieval system
