Oncorhynchus nerka (sockeye salmon): 115136011
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Entry
115136011 CDS
T07952
Name
(RefSeq) endothelial cell-selective adhesion molecule-like isoform X1
KO
K06787
endothelial cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115136011
04517 IgSF CAM signaling
115136011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136011
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
CTX family
115136011
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Ig_5
Ig_4
Sp38
Motif
Other DBs
NCBI-GeneID:
115136011
NCBI-ProteinID:
XP_029527191
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Position
LG10:complement(55694332..55756607)
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AA seq
442 aa
AA seq
DB search
MEMYTLRKFGTLLSLAFLLYFPGVLAQIQMPQSIMKVIEGQKVVLQAWYSTSYSIGKNTI
LWNFVANNSQLIISYTLDSISLGSPQFEERVGFTATMPSANLSLYINNTKESDSGRYFCQ
VIIPGAQGLTGELILDVIVPPAVPECALSGKPVLKGNVTLSCKSKSGKPIPMYKWQKTSP
TSEVFFSPMLNEKTGTLKLSNLSSNMSGKYVCLASNTAGTKRCYINLEVITSTNAGMIAG
ATVGSVLGLIFIILFLVGLLRRRRDSEEDLANDIKEDAQAPKRVSWVKSGGSGSDVVSKN
GTLSSITTANRPHQREPSSQLYPSYNRPPSDTTSIITATGSISGYRPGPRDGASTPTHGH
ALPGYSYNTDTTLTRGQLSNSAAPSANVSPRTQHPQSYTQPQTARPAPRPPPLPTVVTAS
NISRMGGVPIMVPAQNQAGSLV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtatactttgcggaaatttggcaccttgctgtcacttgcatttctcttgtat
tttccaggtgtgctggcccagatccagatgccccagagtatcatgaaggtgatcgaaggt
cagaaggtggtgctgcaggcctggtacagcaccagctacagcatcggcaagaacaccatc
ctctggaactttgtagccaataactctcaactgataatctcctacaccctagactcaatt
agtttaggcagcccgcagtttgaggagcgagtgggcttcacagccaccatgccctctgcc
aacctgtctctgtacatcaacaacacgaaggagtcagactcgggacgctacttctgccag
gtcatcatccccggggcccagggcttgaccggggaacttatcctcgacgtcattgtccct
cctgctgtaccagagtgcgctctgtcggggaagccagttctgaaaggcaacgtcacgctg
agctgcaagtccaagtcaggcaagcccatccccatgtacaagtggcagaagaccagcccc
acatctgaagtcttcttctctcccatgctcaatgagaagacaggcaccctgaagctgagc
aacctgagtagcaacatgtcggggaagtacgtgtgtttggccagcaacacggccggcaca
aagagatgctacatcaacctggaggtcatcacctcgaccaacgcagggatgattgctggg
gccacggtgggctcggtgctgggcttaatcttcatcatcctcttcctcgttggtctcctg
aggagaaggagagactctgaggaggacctggccaatgacatcaaggaggacgctcaggct
cccaagcgcgtctcgtgggtcaagagcggcggctctggctcggacgttgtctccaaaaat
ggcacactctcctccatcactaccgccaacaggccccaccagagggagccctcttcccag
ctatatcccagctataaccgccctccctctgacaccacctccatcatcactgccacaggc
agcatctctggctaccgccccgggccgcgtgatggagcctccacacccacccatggccac
gccctgccgggctacagctacaacactgatacaaccctgacccgcggacaactgtctaat
tctgcagcacccagtgccaacgttagtcccagaactcagcacccacagagctatacccag
ccccagacagcacgtccagccccgcgcccgccacctctgcccactgtcgtgaccgcgtcc
aacatttcccgcatgggaggggttcccatcatggtgccagctcagaaccaggccggctca
ctggtgtag
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