Oncorhynchus nerka (sockeye salmon): 115136014
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Entry
115136014 CDS
T07952
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136014
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
ROBO family
115136014
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
C1-set
Motif
Other DBs
NCBI-GeneID:
115136014
NCBI-ProteinID:
XP_029527200
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All DBs
Position
LG10:complement(56064072..56116721)
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AA seq
1158 aa
AA seq
DB search
MQIGRWLLWVTWLYIWAEGSRQCQCQCTCIPEPGLAEGSKTAVKEHDRHRLEHRQHRPHR
DKPHRRKGSRLRTDVVEVRPRIVHHPSDVVVKVGSPATLSCRADGTPEPSIEWLRNGQPL
EMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYACMARNSAGKATSRNASLYIAAL
REDFRVQPCDVEVAVGEVAVMNCSPPVGHPEPNATWRKDGVPINNTNPHYTELNGKLIIA
PAQKNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDVSVGTGESAQFYCEAKGD
PMPAVEWSRVQGPLPNGRYLVNPDQSLQIHYVTPQDSGRYTCTAVNDVGVVTASAQLVVE
GAASTRQRDLHRELSDLRIALENVTVLTPNSNMSQVQWKLQSFPTQPQYLDGFEVLCRSL
LPASSDWAAKRVPLPNFQTLVGPLKRGYKYDFKVRPYGSSLYGRESNTRHLRVPETVPSA
PPQAVSITRSPDHNDTVYVTWEPPPHKAHNGIIQGYQLWCVQLEEQQYLNWTVDSGTHSL
EINPLYPDKEYWVQVAAVNGAGVGVQSDPHRLVIDSRRSGAPQSDSPSRDLTRVLSVLRN
PVFIGSVGALLCCILMVTAFCLYRRHTRPGDHLGRGHGKAKGLYRLASEDLIIKHRMAAP
DSPWISGAWRPAQSGEKYQGMWAQSQENPGFRKTTKKDPGSLDSAVPIVPDSCGVYGTFY
VDLTGNGLKTFNSPTRCPKRPHCHTTSSSSHYSQYGTEAVRTAVKTMLVKDGQALPPAQP
KMGVLKESWEKNYKRELHAENSAPLVSSRSQALAVRGVPYKQRLSHLPSGGRSECVKPLA
SSRFLHHSASLHLVDMLPTPPPLPMDDTTDTHSLTSEEGSSRSTKLMVDDGSHQSVCAAS
GLRGPPSNPTGFPSYSRLSTASYCLSLDEEQDTTMTSQEVTQYLELSPKAERRSTMPENP
PSSSLSRPFSPTPTLGYICGLLPSDQLEDRLTDDQESQPMGSRRARLQNTPLSLCSEWEG
SLWNGWGSVSEGNMANSARTSFISSSDGSFMNDANFAGVLATVAAESMSVASFSDFSPPA
SPLSALFPPAPDEGAECFGELDPMPVWDWSTTWVEEMEAQYRAQYTSQADAPPACNTRGH
CRADRHCEDRRATGGGRV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattggcaggtggctgctctgggtgacctggctctatatctgggcggaagggtca
cgccagtgtcaatgccaatgcacctgtatacctgagccgggactggccgaggggtcaaag
acagcggtcaaggagcatgaccgtcatcgattggaacaccggcagcatcggccacacagg
gacaagccacaccggagaaaaggttccagactgaggacggatgtggtggaggtgcgcccg
cggattgtccaccacccctcagatgtggtggtcaaggtaggcagccccgccaccctctcc
tgccgcgccgacggcacacccgagccctccattgagtggctccgcaatggccagcccctg
gagatggacaagctggacagccaatcgcggcccatcgtcctatcggagggcagccttttt
ttcctcagcgtggtgccagggaggcggagtcagtcacatgagggcgtgtatgcctgcatg
gcaaggaacagcgctggcaaggctaccagccgcaacgcctccctctatatcgcagctctg
cgtgaggacttccgggtgcagccctgtgacgtggaggtggctgtgggggaggtagcggtg
atgaactgcagcccgccggtaggccaccccgagcccaatgccacctggagaaaagacggg
gtccccatcaacaacaccaatccgcactacactgaactgaatgggaagttgataatcgcc
ccagcccagaaaaatgactctggcgtgtacatctgtgtggcctccaacactgtgggagta
agagagagcagggccgcccgcctgtctgtcctagccaagccagtgttggtgctgaagcct
caggatgtgtcggtggggacaggagagtctgcccagttctactgcgaggctaaaggagac
cccatgccagctgtggagtggagccgagtgcagggccctctgcccaacggcaggtatcta
gtgaatcctgaccagagcctccagatccactacgtgacaccacaggattctgggaggtac
acctgcacagctgtcaacgacgtgggggtggtcaccgccagcgcacagcttgtggtggag
ggagctgcaagcaccagacagagggaccttcacagagagttgtcggacctgcgcatagct
ctggagaatgtgacggtgctgactccaaactccaacatgtcccaagtgcagtggaagctc
cagtctttcccaacccagcctcaatacctggatggtttcgaggtcctctgtcgctctctc
ttgcccgccagttcggactgggctgctaagagagtgccactacccaactttcaaacgctg
gtcggcccgctcaagaggggctacaagtatgacttcaaagtgcgtccctacggcagcagc
ttgtatggccgggagagcaacaccaggcacctgcgtgtacctgaaacggtgcctagcgcc
ccacctcaggccgtctccataacaaggtcccctgaccacaatgacacggtctatgtgacc
tgggagcctccaccccacaaagctcacaacggcatcatccagggataccagttgtggtgt
gtgcagttggaggagcagcagtacttgaactggacagtggacagtgggacccacagtctg
gaaataaaccctctgtacccagacaaagagtactgggtccaggtggcagcagtcaacgga
gctggcgtcggggtgcagagtgacccccatagactggtcatagactcccggaggtccggg
gccccccagtcagacagccccagtagggacctgactcgggtcctttctgtgctgaggaac
cctgtgttcatcggaagcgttggcgccctcctgtgttgcatcctaatggtgacggccttc
tgcctgtaccgccgccacacacgacccggcgaccacctgggacgaggccacggcaaggct
aaaggtttgtacaggttggccagtgaggacctaatcatcaaacaccgaatggcagcccca
gactcgccatggatctcgggtgcgtggagaccggcccagagtggcgagaagtaccagggc
atgtgggctcagagccaggagaaccccggcttcaggaagaccaccaagaaggaccctggc
tccctggactcggctgtccccatcgtgcccgacagctgcggtgtctatgggacgttctac
gtggacctgacgggaaacggcctcaagaccttcaacagccccacccgatgccccaagagg
ccccactgccacaccacctcctcctcctcacactactcccagtacggcacagaggcggtg
cgtaccgctgtcaagaccatgctggtcaaggatggacaggccctgcccccagcccagccc
aagatgggcgtgctcaaggagtcatgggagaagaattacaaacgagagctccatgcagag
aacagcgcccccttggtgtcatcgaggagccaggcgctggctgtgaggggagtgccttac
aaacagaggctcagccatctcccatcaggtgggcgctccgagtgcgtcaagcccctggcg
tcgtcccgcttcctgcaccactcagcctcactgcacttggtggacatgctccccacccca
cccccactgcccatggacgacaccactgacacacacagcctcacctcagaggaagggtcc
agcaggtccactaaactgatggtggatgacgggtctcaccagtctgtgtgtgctgcgtcc
ggtctccgtggccccccatccaaccctacgggcttcccctcctacagccgcctgtccact
gcctcttactgcctgtcattagacgaggagcaggacacgacaatgacctcacaggaagtc
acccagtacctggagctcagccccaaggccgaaaggcgcagcacaatgccagagaatcct
ccttcctcctccctgtcccgccctttctcccccactcccactttgggatacatctgtggg
ctcctcccctccgaccaactggaggacaggttgactgacgaccaggagtcccagccaatg
ggctctcgacgggcccggctccagaacacacccttgtcgctctgcagtgaatgggagggc
tcgctgtggaatggctgggggtcggtgtcagagggcaacatggctaacagtgcccgcacc
agcttcatcagctcgtcggacggctcattcatgaacgatgccaactttgccggcgtgctg
gccactgtggccgcagagtccatgagtgtagcctctttctcagacttctctcccccggcg
tcgcccctcagtgccctgttccctccggctccagatgaaggagcggagtgtttcggggag
ctggatcccatgcccgtttgggactggagtacaacctgggtggaggagatggaggcgcag
taccgcgcccagtacacctcccaggcagatgcaccccccgcctgcaacacccgggggcat
tgtcgtgctgaccgtcactgtgaggaccgccgagccaccggagggggtagggtttga
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