Oncorhynchus nerka (sockeye salmon): 115136026
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Entry
115136026 CDS
T07952
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115136026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136026
04090 CD molecules [BR:
one04090
]
115136026
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115136026
CD molecules [BR:
one04090
]
Proteins
115136026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
C2-set_3
Lep_receptor_Ig
C1-set
LapA_dom
DUF6476
V-set_CD47
DUF4690
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
115136026
NCBI-ProteinID:
XP_029527217
LinkDB
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Position
LG10:complement(57317833..57328645)
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AA seq
426 aa
AA seq
DB search
MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCHIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKMSWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPTTVSRWPGTQVSTE
KPTATALDWPNTKRSPASTPDSQLSTHSQPAHSVFEATGYTLANDSSSNSTSTTGIFDET
ERQRGNGSSAPLLIFLVTCLILGLLVVVAFFVIKLRRAHILWKKENEDSDQSVESSRSKS
SNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTTTSTKTEEAPEIQVIPQTDGATLSPQ
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggttccgttgcagtg
caacatatgaccgtgatggagggtgagactctaactattaagtgtcacattagaaatgct
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atgtcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaacaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagcactcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagtagcaactcaaccagtactacaggaatcttcgatgagacg
gagaggcagagaggaaatggaagcagtgcgccgttgctcatcttcctcgtgacgtgcctc
atccttggtctgctggtggtcgttgcattctttgtaatcaagctgaggagggctcacata
ctctggaagaaagaaaatgaagactctgatcaatctgtggagagcagtagatcaaaatca
agcaatgaagagaaacaatccagaagaaggggaaatggactttttaacattggattcaca
aagtatgtcgttgaggaaccaatggcaacagagacgacaacaacaacaagcaccaaaaca
gaagaggctcctgaaattcaagtcatcccacaaacagatggagcaaccctaagccctcag
atcaaggagacggaactgtaa
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