Oncorhynchus nerka (sockeye salmon): 115136056
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Entry
115136056 CDS
T07952
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115136056
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115136056
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
115136056
NCBI-ProteinID:
XP_029527287
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Position
LG10:complement(58076164..58095918)
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AA seq
494 aa
AA seq
DB search
MMAGGAVEQNGIFLNPLHHNQQPYMESDPPDSRKRPLTPTEEDCCTKRTNTGEEGEYFLK
VLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVH
SFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAV
MEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN
ISGPVANSNPTGSPYANSAEVLPNAAAAAATASSLLGQAGLAGMGGFPGTMSSFSGNDLL
AITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYASDASGS
GHPAVGLGGFSLGSLAAATGASNGYLNASSPLMASSLLAAEKLGEGAKDVVEIAVPENLV
GAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT
YEQGVRATNPQKVG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggtggagcagttgaacaaaacgggatattcttgaatcctcttcatcacaat
caacagccctacatggagtcagatccccccgactctcgtaaacgaccactaactccgacg
gaggaggactgttgtaccaagcgcacaaacacgggagaggagggtgagtacttcctgaag
gtgctgatccccagctatgcagccggctctataattggcaagggtggccagaccatcgta
cagctgcagaaagagacgggcgccaccatcaagctgtccaaatccaaagacttctaccca
ggaaccacagagcgggtgtgtctgatacagggtacggtcgaagctctaaatggtgtccac
agcttcatcgcggagaaagtccgcgagatgccccagagcgcccagaaaacagagccagtc
agcatactgcaaccacagaccactgtcaaccccgatcgcgtcaaacaggctaagttaata
gtgcccaacagcacggctgggctgatcatcggtaagggcggggccacagtcaaggcggtg
atggagcagtcgggtgcctgggtccagctgtcccagaagcctgaaggcatcaacctgcag
gagcgcgtggtcacgatcagcggggagcccgagcagaaccgtaaagccgtggagatcatt
gtgcagaagatccaggaggaccctcagagcagcagctgcctcaacatcagctactccaac
atctcaggccccgtggccaactccaaccccaccggttccccctacgccaactcggctgag
gtccttcccaacgccgctgcggctgctgccactgcctccagccttctaggccaggccggc
ctggcaggaatgggcggcttcccgggaaccatgtccagcttctctggcaatgacctgctg
gccatcacctcggccctcaacacactggccagctatggctacaacaccaacaccctgggc
ctgggcctcaaccccgccgctgcctccggggtcctggccgccgtggctgctagtgctaac
ccagctgctgctgctgccgctaacctcctggcctcctatgccagcgatgcctctggctcc
ggccatcctgctgttggcctggggggcttctccctgggctcgctggccgccgccacgggg
gcctccaacggctacctgaatgcctcgtccccactgatggcttcctccctgctggccgca
gagaagctgggagaaggggccaaggacgtggtggagattgctgtgcccgagaatctggtg
ggcgccatcctggggaaaggcgggaaaacgctggttgagtaccaggagctgacgggagct
cgcatccagatctccaaaaagggagagttcatacctggcacgcggaaccgtaaagttacc
ataacagggtcacctgcggcaacgcaagccgcccagtatctgatcagccagaggatcacg
tatgagcagggtgtgcgtgccaccaacccacagaaggtgggctaa
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