Oncorhynchus nerka (sockeye salmon): 115136094
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Entry
115136094 CDS
T07952
Name
(RefSeq) POU domain, class 2, transcription factor 3-like
KO
K09364
POU domain transcription factor, class 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115136094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115136094
03021 Transcription machinery [BR:
one03021
]
115136094
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115136094
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115136094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115136094
NCBI-ProteinID:
XP_029527374
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All DBs
Position
LG10:59548664..59562443
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AA seq
399 aa
AA seq
DB search
MSTDGVEHSEAHHEQADNEQNGIDFTRQIKTEVLNDSPHSVLSHKTCHLTQGALISGGQL
SGEVSSSHTMQQLVLMPGSHHLSPPSSFLLSQTQHTGHQALLQQNLLSFPTQSQSGLLQH
QPGLALTPQAMSRSGLTSSSMEGHLDMSHLQVPKHMGPPQQDEASDLEELEQFAKAFKQR
RIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENCPS
DSMSNAVSLPPLMEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEIMLISEQLSMEK
EVVRVWFCNRRQKQKRIYCPVSTSPMKSHNFNSRMASTSRSYSPPASGVSSSSSPNSPSR
GPSPGTLRSGSAALTSQVNQSFSSPGSWYRTWNPTSYHH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacggagtggaacactcagaggctcaccatgaacaagcagacaatgaacaa
aatggaattgacttcaccagacaaatcaagacagaggtcctcaatgactctccccattct
gtcttatcacacaagacatgtcacctgacacaaggagccctaatatctggtggccagcta
tcaggggaagtctcctcctcacacaccatgcagcagttggtgcttatgcccggctctcac
cacctctcacccccctcctccttcctcctctcacagacacaacacactgggcaccaagca
cttctgcagcagaacctcctcagctttcccacccagagccagtcaggcctcctccagcac
cagcctgggttagcattgacacctcaggccatgagtcggtcgggcctgacgtcgtcgtcc
atggaaggccacctggacatgtcccacctgcaggtccccaaacacatggggcccccccag
caggacgaggccagtgacctggaggagttggaacagtttgccaaggccttcaaacagaga
cgcatcaaactgggcttcacccagggtgatgtaggcctggctatggggaagctgtatggg
aatgacttcagccagaccaccatctcccgcttcgaggccctcaacctaagcttcaagaac
atgtgcaagctgaagcctctacttgagaaatggctgagtgacgcagagaattgcccctct
gactctatgagcaatgctgtttctctaccccccctgatggaaggctatggaaggaaaaga
aaaaagaggacaagcatcgaaaccaacataaagctcaccctggagaaacgcttccttgac
aaccccaagcctaactcggaggagatcatgctgatctcagagcagctgtctatggagaag
gaggtggtgcgggtgtggttctgtaaccgcagacagaagcagaagaggatctactgcccc
gtgtccacctcaccaatgaaatcacacaacttcaactccagaatggcatccacgtccaga
tcatacagccctcctgcttcaggagtgtcatcgagttcctctcccaatagtcctagtcgt
gggccttcgcccggaacactccggtctggctccgctgctctgacctctcaggtcaaccag
tccttcagctcaccagggtcgtggtatcgcacatggaaccctacatcctatcaccactga
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