Oncorhynchus nerka (sockeye salmon): 115136170
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Entry
115136170 CDS
T07952
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115136170 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115136170 (zmat2)
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115136170 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
115136170 (zmat2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
DUF4250
C2H2-zf_KIN17
Herpes_gp350_A
MG280
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
115136170
NCBI-ProteinID:
XP_029527559
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Position
LG10:complement(63422517..63425518)
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AA seq
204 aa
AA seq
DB search
MASGSGSSGGGNSSKNDFRRKWDKDEYEQLAQKRLDEERDKKDGKPAPPVKRELLRHRDY
KVDLESKLGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRV
ERSSLDQVKKRFEVNKKKIEEKQTEYDFEERMKELREEEEKAKAYKKEKQKEKKRKAEED
LFEEDDEMAAVMGFSGFGSSKKGK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcagtgggtccagtggtggaggtaatagcagcaagaatgattttcgacga
aagtgggacaaagatgagtatgaacaactggctcaaaaacgtctcgatgaggagagagac
aaaaaagatggcaagccagcgcccccagttaagcgggaactcctgcgacacagggactac
aaggtggacctcgagtccaagctgggtaaaaccattgttatcaccaagaccacaccacag
gctgagatgggcgggtactactgcaatgtgtgtgattgtgttgtgaaggattccatcaac
ttcttggaccacatcaatggcaagaaacaccagaggaatctgggaatgtccatgcgcgta
gagcgatcctcattggaccaggtgaagaaacgatttgaagttaacaagaagaagattgag
gagaagcagacggagtatgattttgaagagcgcatgaaagagcttcgagaagaggaggag
aaagcaaaggcttacaagaaggagaagcagaaggaaaagaagcgcaaagcagaggaggat
ctttttgaggaggatgatgaaatggctgctgtgatgggattctcggggtttggttcatca
aagaaaggcaaatga
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