Oncorhynchus nerka (sockeye salmon): 115136184
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Entry
115136184 CDS
T07952
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
one04520
Adherens junction
one04916
Melanogenesis
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115136184
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115136184
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115136184
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115136184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115136184
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115136184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115136184
NCBI-ProteinID:
XP_029527572
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All DBs
Position
LG10:complement(64449624..64519372)
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AA seq
497 aa
AA seq
DB search
MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETNQSSNA
AAVRRSQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
MPPSGKLDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKES
AAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRGCAGEKSKA
DWGKKKRRKREKQQDSSADPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWCTSP
TSSDGSAIDSPLSPVDGIPPQPASPLHNPLHLLPSKHTPLILSKSTTTELSFKALIESSQ
QHDNIHHHHDCTLPKSH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagttcgaacgca
gcggcggtcagacgaagtcagcaaaacgaacatagaggttatcaagagaaacaccgggag
catctcgacagcgtgtccaaacatcaagatggagggatgtataaaacagcgtatccaggg
tacccgtttctcatgctgcctgacccgtacatccccaacggatccatgtccccatcttcc
aacaaagtttcagtggtccaacagtctcacgggatgcaccccctgacgtccctgctgccc
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaa
ggcgttcacaggccccagtcccaggacatctcaggtttctactccctaccccctggcggt
gtaggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctggggccaggcatgcaccccacggggatcccccacccagccatc
atgcccccttcaggcaaactggaccattatgacaggaacatgtacgctaagcctcaccag
gagcccaagcgggagaaggagcccaagaagccggtgatcaagaagcctctgaatgctttc
atgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacactgaaggagagc
gctgccatcaaccagatactgggccgaaggtggcacgccctgacccgggaggagcaggcc
aagtactatgagctggccaggaaggagcggcagctacacatgcaactctaccccagctgg
tccgccagagacaactacgatgcaggccttagagggtgcgcgggggaaaagagtaaagct
gattggggcaagaagaagagaagaaaaagagagaagcagcaggactcctcagcagaccct
ggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggactggtgcggt
ccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgcaccagcccc
acttcttccgatggaagcgctatagactcgcccctctcccccgttgacggcatcccccct
cagcctgcttcccccttgcacaaccccctacacctcctgcccagcaaacacacacccctt
atcctctcaaaatccacgaccacagaactgtctttcaaagctttaatagaatcatcccaa
cagcacgacaatatccatcatcatcatgactgtaccctgcccaagtctcactag
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