Oncorhynchus nerka (sockeye salmon): 115136190
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Entry
115136190 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 6-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115136190
00071 Fatty acid degradation
115136190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115136190
09143 Cell growth and death
04216 Ferroptosis
115136190
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115136190
03320 PPAR signaling pathway
115136190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115136190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115136190
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115136190
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115136190
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115136190
Exosomal proteins of breast cancer cells
115136190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115136190
NCBI-ProteinID:
XP_029527599
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All DBs
Position
LG10:complement(65417365..65465757)
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AA seq
723 aa
AA seq
DB search
MLAFVLISGSIWIILELSSTLMERMQTQELQSSLQLPELDELNQFFRSLPISTLVGIGAL
TAVLAYWLATRPRAISPPCNLQHQSEEVAHEDGVRRSMLGDSPNNLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPEKPYKWLSYKEVTTRAEYLGSGLLSQGCTPCPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIVTVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDPALLEEGAGCGVIVQSMQDVEDLGRENHRKPLPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIQSVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPIKRWLLNFAAK
RKGAEVSRGIIRMDSLWDKIFFSKIQASLGGRLRVIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFARKGEGEVCVKGPNV
FKGYLKDPERTAETLDTDGWLHTGDIGRWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIHIHNEQFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccttcgttctgatctctgggtctatctggattatattagagctgagttccacc
ctgatggagaggatgcagacccaggagctgcagagcagtctacagctgccagagctggat
gagttaaaccagttcttccgctccctgcccatctccacactggtgggcatcggtgccctg
accgctgtgctggcctactggctggccacacggccacgtgccatctctcctccctgcaat
ctccaacaccagtctgaagaagtggcgcatgaagatggggttcgcaggtccatgctgggg
gacagccccaataatctgctgacacactaccacgaggatgccaaaaccatgtatgaggtg
ttccagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccgaa
aagccttacaagtggctgtcctataaagaggtcacaacccgggcggagtacttagggtcg
gggctgctgagccagggctgcacgccgtgcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacgctacatcatcaacactgcggacatc
gtcacagtaatctgtgacaagcctgagaaggcccaggtgcttttgggtaacgtggagagg
caggagacccctgggctgaagagaatcatcctgatggacccctttgatcctgccctgctg
gaggagggggcgggctgcggggtcatcgtccagtccatgcaagatgtggaggatctgggc
agagagaaccacagaaagcccctgccacctacaccagaagatctgtccatcgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacacgggaatgttgtggct
gatttctcaggcttcctcaaagtgacagataaagtaatattcccaaaccaagacgacgtt
cttatctccttcctgcctctggcgcacatgtttgaaagactcatccagtctgtggtgtat
tgtcacggtggccggatcggtttcttccaaggcgacatccgcctgttgtctgatgacatg
aaggccttacggcccaccatcttccctgtggtacctcgactgctcaaccgcatgtacgac
aagatattcagccaggccaacacccccattaagcgttggctgctgaactttgcagctaag
agaaaaggggcagaggtcagcagggggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgcgtgattgtaactggagct
gcgccggcctcccccactgtactggggtttctcagggctgcactgggttgtcaggtgtat
gaggcgtatggccagacagagtgtactgctggttgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccattgccatgtaacctcatcaagctggtggatgtggct
gagaagaactactttgcacgcaagggagaaggagaggtgtgtgtgaaaggacccaatgtt
ttcaagggctacctcaaagaccctgagaggactgctgaaaccctggacacagatggttgg
ctccacaccggagacatagggagatggttacctaacggtacactgaagatcattgacagg
aagaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagcctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcatgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgttctgaagaaagccatcatg
gaagacttgcagagactgggcaaggccagtggcctccactcgtttgagcaggtgaaaaac
atccacatccacaacgagcagttctccatacagaatggcctgttgactcccacactaaaa
gcgaagagacccgagctgagggagtttttcaaggagaagattgaagacctgtacgaaaac
atctccatgtga
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