Oncorhynchus nerka (sockeye salmon): 115136206
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Entry
115136206 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115136206
04082 Neuroactive ligand signaling
115136206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115136206
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115136206
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115136206
NCBI-ProteinID:
XP_029527629
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All DBs
Position
LG10:66340694..66367202
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AA seq
463 aa
AA seq
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MGGRTGTAILLCVWACLLVANVLCGKSSGQNGQTDEQKDNTTVFTRILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggccatactgctatgtgtgtgggcctgtttgctggtggcc
aacgtgctttgtgggaaaagctctggacagaatggccagacggacgagcagaaagacaac
acaacagtgttcacccggatcctagacagtcttctagatggctacgacaatcgtctcaga
ccagggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattggg
cccgtctcggaccatgacatggaatacaccattgatgtgttcttccgtcaaagctggaag
gacgagcggctaaaatttaaagggccaatggcggttctccgtttgaacaacctgatggcc
agtaaaatctggacccctgacacattctttcacaatggcaagaagtctgtggcacacaac
atgactatgcccaacaaactcctacgaatcacagaggagggaactctgctctatactatg
agactgaccgtaagggcagagtgtcccatgcacctggaggacttccccatggatgcccat
gcttgcccactgaagttcggcagctatgcttacaccagggctgaggttgtgtacgtgtgg
acgagaggggcagcccagtctgttgtggtggctgaagatggctctcggctcaaccagtat
gatctgatgggacaaagcgtggattctggggttgtccagtccagcacaggagagtatgtt
gtcatgacgacacacttccacctgaagaggaagattggttattttgtcatccagacgtac
ctgccctgcatcatgacggtgatcctgtcccaggtgtccttctggctcaacagagagtcc
gtcccagccaggactgtgttcggagtgacaacggtgctgaccatgaccaccctcagtatc
agtgctaggaactctctccccaaggtggcctatgccacagccatggactggttcattgca
gtctgctatgcctttgtcttctctgccctcattgagtttgctacagtgaactacttcaca
aagaggggctacgcctgggatggaaaaagtgtggtgccagagaagcaaaagaagaagaag
gagtccctcctgaagaagaacaacaccaccgcctacactgccgccactgctacagccttc
gctccaaacattgccagagatcctggtttggccaccattgccaaaagtgctccccctccc
cccactgagcccaaggaagagccaaagcccaagccaccagaggccaagaagaccttcaac
agcgtcagcaagatcgacaggatcgccagaatagccttccccttactctttggaaccttt
aacctggtctactgggcaacttacttgaataaaaagcctaagttacagggtatgacccca
ggatcccactaa
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