Oncorhynchus nerka (sockeye salmon): 115136207
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Entry
115136207 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115136207
04082 Neuroactive ligand signaling
115136207
04519 Cadherin signaling
115136207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115136207
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115136207
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF2070
Motif
Other DBs
NCBI-GeneID:
115136207
NCBI-ProteinID:
XP_029527631
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Position
LG10:66295874..66316026
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AA seq
468 aa
AA seq
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MEIITVDHGFVAVECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEI
LRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL
MNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERL
KSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTV
LTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAA
SIKAAQEAAEAGRTDGESSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAV
PSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaattataacagttgaccacggctttgtggctgtggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgtgtattggatagattacta
gatggatatgacaacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagctttggtccagtgtcagatgttgagatggagtacaccatggat
gtattcttccgtcaaacgtggattgacgagaggttgaaattcgagggccccatcgagatt
ctgcgtctcaacaacctcatggtcagcaagatctggacgccagacacattcttccggaac
ggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgcatcatgcag
aacggaactatcctctacactatgagattgacgataaatgcagagtgtcccatgagactg
atgaacttccccatggatggccatgcctgtcctctcaagtttggtagctatgcctaccct
atgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaagtcccagag
gagtcctccagcttgctacagtacgatctaataggacagacagtgtccagtgagaggtta
aaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaaggaagatg
ggcttcttcttgattcagacatacatcccctgtatcatgaccgtgatcctggctcaggtc
tctttttggatcaataaggaatcggttcctgcacgaactgtattcggcattaccacagtg
cttaccatgaccacactcagcatcagtgcccgccactctttgcccaaagtctcttacgcc
acggccatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgag
tttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgcaaggcggcc
tccattaaggcagcccaggaggcagcagaggccgggaggaccgacggggagtcctcttcg
gacgccagcagtatgctgaagaagaggatgaactctacgcctcactttgagaggccagcg
gaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggctcagctgtg
ccgtccaacaacttactgacaggcaccagcatcatagacaagtactctcgcatcctcttc
cctctgtcgttcggggccttcaacctggtgtactggatcgtctatctcaccaaggacacc
atggagatgacaagggacagcgtgtga
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