Oncorhynchus nerka (sockeye salmon): 115136285
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Entry
115136285 CDS
T07952
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115136285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115136285
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
115136285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
115136285
NCBI-ProteinID:
XP_029527732
LinkDB
All DBs
Position
LG10:58288145..58303017
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AA seq
1828 aa
AA seq
DB search
MAASAASAGSTPGFCPSYAVICSFLERYGTLLDLPELTFPQLERYLQDTISVPKILVDLH
VKLLRKIGKSVSADRWEKYLVKVCHEFNSTWAWELENKGYKDMSVEYKTGILKHLCECQF
DDNVKFKTAINEEDPDKMRLLPIGKDKDGLMYWFQLDQDKNVRVYVEEQDDLDGSSWKCI
VRDRNSLAEILALLKTQIDPALLTKKEGEEEDEAKNNTGGEGEVKKTEDTSEDEEDKPSK
GTTSLVSPKTEITEKEESQLDESDAKSSLNGLKDESESKSQSEEPMVDDKVTINTWAIKE
EPMEVSESKESTTTNATEPLAEKPCLTPQTEQTDEAKRKTANELQRAMKNDQQAKIPLKK
REMKLCENFDNNSGGGSSIFVRNPSVAPVKEAPEVEETSKEISDAPVGTIECISDQMNGD
AQPTTETSVNNGLRDSVDGKKQQTKAAAGEERKAAEASAKEKINLDKEKEEMASNTEVAM
ANETSLQKMVPAEKESTEYSEEVKKSALKEAKSPSPLMTKPLTSSKDATSPPEKHSDCKE
EQNVKVSKWDVKVCRTEHTTYTSIETDENPLSSKSQKPDETKGTDSSITSQEVKSAVSKE
TDKTVVNKDGYPLSVVKDMEKNTLHKRYRKVVKPTEISEKSKDAENLAISQETNTSSFLK
KADKPVSNKEAEKLESIKETKSLVIKMTVKPEASKHAEKCDNPKDNKMSAVTKEKPAVGT
DAKAAAEVKEKAVLEEVFSASICKDEMRTVAKATRTQSGPKDMEMADVSEKTTQSQLGEP
KKVEKSATPKDAEKCATPKDTDKSTELVTPKEDAEKSAKSATPTPKDAEKSAKSATPTPK
DAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKVAEK
SAKNTETISKKIVLSSRGQKPDTEETEKLADTKPVAEKGEKLVTFQDAKQLPSLKKSVPV
EVKQEEPMEMCSEKSTHDNIKIKGHAEKGWPKKAVKSGVKSETNPIKDPKPMNCDASSEK
QAISKKASSLTEGETDKSQHKVIKEDATTQGCPPKEDGSKPDHPKKNDKMEDDGTEKDDK
NSTVEEKLVQAKASEGSEEDDNKEDEDKGEKKDAGTTSEIQEEGIRLKIRGITHRRRAEL
QRKERDSGSDTGETGRSLRRSPRICRPTAKGVEFQDRRMEKKEATPPVEKGDEEKTVQRK
PREKVDQDGLYKSKGRRRRKTRWSNTRTQRRKNNDSGEDYESESSEEESEEDNSDESFKV
ERGKRRKRNRERHSDDSDTSSDDDLPPNDDPCKHCGLPNQPELILLCDSCDSGYHTACLR
PPLMIIPDGEWFCPPCQHKLLCDKLEEQLTNLDASLKKRERAERRKERLVYVGISVENII
TPSLEVEEEREEEVVKKEKKERTKSWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIREAD
GGGAGRGKDMANITGHSRGKDMSTILAAGEGGEGGEGKENGCLPRPNASQRRKKRRRLND
LDSDSTMEEEESEDEFRLSDNTEEEEFVASDKSDAESEVAVDSNDDSDFGSTQRRTARTR
RPAKRQRSAQPRRRRTPRRYSDDEEETSEEEMVSEGSSEFSDSDLDCSRRRSRRSQTTKQ
VNYCESSGDSDGSKANTNRDKVKPWRRLASSDSEASSSRGSDDSERERTRLKRRADSSEK
ESQQHRRRLSLKRRRASEEDDDDHDSDESSEGERPVRKRVNRIDSDDSDKEEEEEKETKE
TREEEEGGVLGKGASPLDYGLVELHPPTNGQSPIKALEGLAHIGPQKPGATAVAIAPNGL
ELAPQDDDEDDLLGVTDLVDFVCNSDML
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcatcggcgggttctacccccggtttttgcccaagctacgccgtg
atatgctcttttctagagcggtatggaaccttgcttgatttaccggagcttacatttcca
cagttggagcgatatctccaagacacaatctcagttccaaagatcttggtggaccttcac
gtgaagttgttgaggaagattggcaagtcagtgtccgcagacagatgggagaagtacctt
gtgaaggtgtgccatgagttcaacagtacttgggcatgggagcttgaaaataaaggatac
aaggacatgtctgtggagtacaagactggaatcctcaaacatttgtgtgaatgccagttt
gatgacaatgtaaagttcaagacagcaatcaatgaggaggatcctgataagatgcggctt
ctccccattggcaaggacaaagatggcctgatgtactggttccaacttgaccaggacaag
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcttcctggaagtgcatt
gtcagagacagaaacagcttggctgagatcctggcactgctaaagactcaaatcgaccca
gcactgttgactaagaaagaaggagaggaggaagatgaggcgaaaaataatactggggga
gaaggggaagttaaaaagacagaggatacctcagaggatgaagaggacaaaccctccaag
ggaacaacttccttagtctctccaaaaaccgagattacagaaaaagaggaatcacagcta
gacgaatcagatgccaaatcctcattgaatggcctcaaagatgagtcagagtcaaaaagc
caatcagaggagcctatggtggatgacaaggtcaccataaacacctgggccatcaaagaa
gagccaatggaggtgtcagaatccaaggagagcacaaccacaaatgctacagagcctctt
gcagagaaaccttgtctgacgccacaaacagaacagacagatgaagccaagaggaagact
gcaaatgaactccaaagggccatgaagaatgaccagcaggccaaaatcccattgaaaaag
agagagatgaaactttgtgaaaattttgataataatagtggcggtggcagtagtatcttt
gtgcgaaacccatctgttgctcctgtcaaagaagctcctgaagttgaggagacaagtaaa
gagatctctgatgccccggtggggacgatagagtgtataagtgatcaaatgaatggtgat
gctcagcctacaacagaaacaagtgtcaataatggtttaagagactctgttgatggcaaa
aaacagcaaacaaaagctgctgctggggaagaacgtaaagcagcagaagctagtgcaaaa
gagaaaataaacctggacaaggagaaagaggagatggcaagcaacactgaggtggccatg
gccaatgaaacaagtctacagaaaatggttccagcagaaaaggaaagcactgaatattca
gaggaagtaaaaaaatcggccttaaaagaggctaaatctccgtcccctctaatgacaaag
ccattgacttcatctaaggatgcaacaagcccaccggagaagcactctgattgtaaagag
gaacaaaatgtcaaggtatccaagtgggatgtaaaagtgtgtcgtacagaacacacaacc
tatacatcaatagaaaccgatgaaaaccctttgtctagtaagtcacagaaaccagatgaa
actaaaggaacagattcatccattacctctcaagaggtcaagtcagctgtctctaaggaa
acagacaaaacagttgtgaataaggacggttatcccctttctgtcgtgaaagatatggaa
aaaaacaccctgcacaaaaggtacagaaaagtggtcaaacccacagagatttcagaaaag
agtaaagatgctgagaacctggccatctctcaagagaccaatacgtcctcattccttaaa
aaggcagacaaaccagtttccaataaagaagcagagaaactggagagcattaaagagact
aaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacatgcagagaaatgt
gataaccctaaagacaataaaatgtcagctgtcaccaaggagaaacctgctgtaggcaca
gatgcaaaggctgccgctgaggtgaaggaaaaagctgtcctggaggaagttttctcagcg
tctatctgtaaagatgaaatgagaactgttgctaaagcgactaggacacaatctggacca
aaagacatggagatggcagacgtctctgagaaaacaacccaatcacaactgggtgaaccc
aaaaaggtagagaaatcggctacccctaaagatgcagagaaatgtgctacccctaaagac
acagataaatctactgaattggttacccctaaagaagatgcagagaagtctgctaaatct
gctacacctacccctaaagatgcagagaagtctgctaaatcagctacacctacccctaaa
gatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagagaagtctgct
aaatcagctacacctacccctaaagatgcagagaagtctgctaaatcagctacacctacc
cctaaagatgcagagaagtctgctaaatcagctacacctacccctaaagtcgcagagaaa
tcggctaaaaacacagagacgatctctaaaaagattgttctatcttctaggggacagaaa
ccagacactgaagaaactgagaaactggcagacacaaagccagttgcagaaaaaggagag
aaacttgtcacctttcaggacgccaagcaattaccctctctcaaaaagtctgtcccagtg
gaggtgaaacaggaggagcctatggaaatgtgttcggaaaagtcaacacatgacaacata
aagatcaagggacatgctgaaaaaggctggcctaaaaaggctgttaaaagtggagtaaag
tctgagaccaaccctatcaaagacccaaagcccatgaactgtgatgcatcatcagaaaaa
caggctattagtaagaaggcatcatctctcactgagggtgagacggacaaaagccagcac
aaagtaatcaaggaagatgccacaacacagggatgccccccaaaagaggatgggagtaag
cctgatcatcctaagaaaaatgacaaaatggaggatgatggaactgagaaagatgacaaa
aattcaacggtagaagagaaattggttcaggcaaaagcaagtgaggggtctgaggaagat
gataacaaagaggatgaggacaagggtgaaaaaaaggatgcgggaacaacatcagagatc
caagaggagggaattcgcctgaaaatacgcgggattacccaccggaggagagctgagctc
cagagaaaggagagggactctgggtcagatactggtgagactgggagatccctgaggagg
tcacccaggatctgcaggccgaccgctaagggggtggagttccaggacaggaggatggag
aagaaagaggccacaccccctgtagagaagggtgatgaggagaaaactgttcagaggaaa
ccgagagagaaggttgatcaagatggactgtacaaatctaaggggcgacggaggagaaag
accaggtggtccaacactcgaacacaaaggcgcaaaaataatgattctggtgaagactat
gaaagtgagtcgagtgaagaggagagcgaagaggacaacagtgatgaaagctttaaggtg
gagaggggcaagaggaggaagaggaacagagagaggcacagcgatgactctgacacctcc
tcggatgatgacctccctcctaacgatgacccctgcaaacactgcggcctccccaaccaa
cctgagctgattttgctgtgtgactcgtgcgatagcggctaccacacggcctgcctcaga
ccccctctcatgatcatcccagacggggagtggttctgcccaccctgccaacataagctg
ctctgtgacaagcttgaggagcagcttactaatctcgatgcttccctgaaaaagagggag
cgcgctgagcgacgaaaagagcggttggtctatgttggaatcagtgttgaaaacatcatc
actccctcgttggaggtagaggaagaaagggaggaagaggtggtaaagaaggagaagaag
gagcgaaccaagagctggggtcgaaggtccacaagggcaaagaaaagcataagctacagg
tttgatgaatttgatgaggctattgaggaggcaattgaagaagacatcagagaggctgat
ggtggaggagctggtcgaggcaaggacatggccaacatcacaggccatagcagagggaag
gacatgtccactatcctggcagcaggagagggtggcgagggcggcgagggcaaggagaat
gggtgcctgccacggcccaacgccagccagcgcaggaagaagcgccggcgtctcaacgac
ctggacagcgacagcactatggaggaggaagagagcgaggacgagttccgtctcagtgac
aatacggaggaagaggagtttgtggcgtcggacaagagcgatgcagagagcgaagtggca
gtcgactccaatgacgacagcgacttcggcagcacacaacgcagaaccgccaggacaagg
aggccagccaaacgtcagaggagtgctcagccgcgacggcgccgcacaccacgaaggtac
tcagacgatgaagaggagacgagtgaggaagaaatggtgtcggagggctccagcgagttc
agcgatagcgacctggactgtagccgacgccgatcccgccggagtcagacgacgaagcag
gtcaactactgcgagtcgtccggagactctgacggctccaaggccaacacaaaccgtgac
aaagtcaaaccgtggcggcgcctcgccagttcagacagcgaagcgagctcctccagaggc
tcagacgacagcgagagggagaggactaggttaaagaggagggccgactcgtccgaaaaa
gagtcccagcagcaccgcagacgactttcgctgaaacggcggcgagcctctgaggaggac
gatgacgaccacgattccgatgaatcatctgagggagaacgtcctgtccgcaagcgtgtg
aaccgcatcgactcggacgactctgacaaggaggaggaggaggagaaggagacgaaagaa
accagggaagaggaggaagggggagtgctggggaagggagccagcccgttggactacggc
ctggtggagctgcatccccccaccaatggacagagtcccatcaaggccctagagggcctg
gctcacattgggccccaaaaacctggggccacagctgtcgccatagcacccaatggactg
gagttggcaccacaggatgatgatgaggatgacctgctgggggtcacagacttggtggac
tttgtctgcaacagtgatatgttgtaa
DBGET
integrated database retrieval system
