Oncorhynchus nerka (sockeye salmon): 115136617
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Entry
115136617 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115136617
03012 Translation factors [BR:
one03012
]
115136617
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115136617
mRNA cycle factors
Stress granule specific factors
115136617
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115136617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
115136617
NCBI-ProteinID:
XP_029528042
LinkDB
All DBs
Position
LG11:complement(3886947..3955198)
Genome browser
AA seq
1755 aa
AA seq
DB search
MNKAPQPITGPPSATHPAPSPGIQQATFPPGQPPSVVFATPPPQMNPAPQHRQFAPGPRA
LHQQGGFRSLQPYYSRPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQQGP
AYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSVPAAPV
IMNPPPQQQQPPSQQQIHPKRERKQVQIIIRDPNQGGRDITEEIMSGGTRSGTTPTPPQV
SDDSSESSISGSEGPAVGQADGENVTPVVVRPDDRGNPAATLITGPLALSKTPELVKTYP
APTEVKLPDTDSKSPSLSQDLPTPPSVTTSHHNTVPTTPQPSTSPIADMMDAPAAAPTPS
APEVPAYPAPLPEPRPTPEEHPSAAKEEREEVKIKEEVAEARQEVTTSSKPEPSLAPVIT
PSSSANGISATQPPPAKEEEPAALSINMPTPQAAEPPPESPIAQPEELRLPNGLPLPSPQ
DPEKMSAESSECDVSPIAEPEVAQLQSEAPMPKLTPVAVTAMPAPIVKATPAPVAQATPA
PVAQATPAPVAQATPAPVAKATPVAKATPAPVAQATPAPVAQATPVLAETATTTVITAPR
VEDEMDSPPPQSTTPAGESSMQAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVESTP
EPEQATPTSASDAKEPRPANTPAVEEVDETWEEKEDKLDAENIEPKPEDLKYQYKEELCR
PIDPEEKKRYDRDFLLGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNM
GPDFTPSFANLGRPGMGGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTED
VKLNKAEKAWKPAVKKATSGQAAPEEESDDSEQAKTQELFKRVRSILNKLTPQMFQQLMK
QVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLIGLKVPTTDKPGVTVNFRK
LLLNRCQKEFEKDKDDDVIFEKKQKELDAAATEEKDRLKAELEEAKDQARRRSLGNIKFI
GELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFAQM
DKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKDAELEEHREVLKVQQ
QLLNQNTRGGVGGRGGGGRDQGSRGGQHPQTGQRSQPQDEGWNTVPISTKSRPIDTSRLS
KITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNR
FSALQPQQPSSAGPSHDSDRRVPQRNSSSRDRGSDRFERHDRGSNDRFDRRDDRRDDRDR
NRPPVTKRSFSRETEEHSREREHSGPADPVRRVASMTDDRSSRDRARSKDNVKREATLTP
PPAQNKPALSEEMLEKKSTAIIEEYLHINDMKEALQCVVEMNSTPLLFVFVRSGLESTLE
RSPIVRERMGLLLHQLYKAGTLPKEQYYRGLQEILEVAEDMAIDVPHIWLYLAELITPML
HEGGIPMGQLFKEISKPLVPQGTAGVLLVQILTLLCKGMSHKKAGAMWREAGLSWKDFLP
EDEDVNKFVTEKNVEFTLGGGGDDEKSSKKELSSEELNKQLDRLIQDKADNQRIYDWVEA
NLDETQMSSNMFVRAVMTSICQSAIICENPYKLDAKVITRRAKLLHKYLKDEQKELQALY
ALQALMVEMEQPANLLRMFFDTLYDEDVINEEAFNKWESSKDPAEMQGKGVALKSVTAFF
TWLREAEDEESDNNS
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacgggacccccctctgccacccaccctgccccctcc
cccggaatccaacaggccaccttccctcctggacaacccccttctgttgtctttgccacc
ccacctccacaaatgaacccagcaccacagcaccgacagtttgcccccgggccccgtgct
ttacaccaacagggaggattcaggtcactgcagccgtactacagccggcccagcaatgcc
ccccgggtgccccccagcagcacgccaaggcctgtggcgcccacacacgtctaccagccg
ggccaacagatgatgatgatcccctcacagcagatccccttccccaaccaacagggcccc
gcctacttcatacccggacagtaccggtcaacgtacgtggccacccctcagcagtacccg
gtcccaccgggcactccaggcttctacccaggcaccagcccagctgaatatggtacatat
gcaggggcatactacccggcccaacagcagtacacgtcctccgtgccagctgctccggtc
atcatgaaccctcccccccagcagcagcaaccaccttcacagcaacagatccaccccaaa
agggagcgcaaacaggtacagatcataatacgagaccctaaccagggtggtagagacata
actgaggagattatgtcagggggcacccgcagtggcaccacccccacacccccacaggtg
agcgacgactcttcagagtcgtctatatctggatcagagggcccagccgttggccaggcc
gacggggagaacgtgacacctgtcgtggtcagaccagatgaccgagggaatcctgcagcc
actctcataactggccccctagccctgtctaaaacccctgaactggtcaagacttaccct
gccccaacagaggtcaaactcccagacacagacagtaaatccccttccttatcccaggac
ctacccacacccccgtcagtaactaccagccaccacaatactgtccctactaccccccaa
ccctcaactagtcccattgcagacatgatggacgctccagccgctgctccaactccatct
gcccctgaagtgcccgcttaccctgcacccctgcctgaaccccgccccactcctgaggag
catccctcagctgctaaggaggagcgggaggaagtgaagattaaagaggaggtagcggag
gctaggcaggaggtgactacatcatccaaacctgagccttcccttgctccagtgatcacc
cctagcagcagcgctaatggtatctctgccacccagccacccccagccaaggaggaggag
ccagcagccctgtccatcaacatgcccaccccccaggcagcagaaccccccccggagtct
cccatcgcccagccagaggagctcaggctgcccaatggcctgccgctccccagcccccag
gaccctgagaagatgtctgcggagtcgtcggagtgtgacgtcagccccattgctgagcct
gaggtggctcagttacagagcgaggcacccatgcctaaactgacgcctgttgcagtcaca
gccatgcccgccccaattgtcaaggccacgcccgcccccgttgcccaggccacgcccgcc
cccgttgcccaggccacgcccgcccccgttgcccaggccacgcccgcccccgttgccaag
gccacgcccgttgccaaggccacacccgcccccgttgcccaggccacgcccgcccccgtt
gcccaggccacgcctgtcctagctgagactgctactactacagttataactgctccccgt
gtagaagacgagatggactctccaccaccacagagcaccaccccagccggggagagttct
atgcaagctgctgtttctgtgccaaaaaaaaagaggaagatgaaggatctgaacaagaag
gaggctgttggagacctcctggatgcctttaaggaggagcaggtagtggagagcactcct
gagccagagcaggccacacccacttctgcctctgacgctaaggagccccgcccggccaac
acccctgcagtcgaagaggtggatgagacgtgggaggagaaggaggacaaactggatgca
gagaatatcgaacccaagcccgaggatctgaagtaccaatacaaagaggaactatgtagg
cctatagacccagaggagaagaagaggtatgacagggacttcctgctgggtttccagttc
atcagtgccgccatgtccaagcctgagggcctgcctcagatcagtgacgtggtgctggac
aaggcgaataaggcccctctccgccagctggaccccagccgtttgccagggatgaacatg
ggccccgacttcacaccctcgtttgccaacctgggcaggcctggaatgggaggaggtgga
ggtggccacagaggaggaccaccctctggtatgggtggtggaggaccgcgtcgctcccaa
cagggtcagcgtaaggagcccaggaggatcatcaacatctcttcgtctctgacggaagac
gtgaagctcaacaaggctgagaaggcctggaagcccgctgtcaagaaggctaccagtggg
caagctgctcctgaggaggagagcgacgactcggaacaggccaagacccaggagctgttc
aagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacagctgatgaag
caggtcacagagctgaccatcgatacagaggagaggctgaagggagtgatagatctgatc
tttgagaaggccatctctgaacccaacttctccgtggcctacgccaacatgtgccgctgc
cttattgggctcaaagtccccaccacagacaagccgggagtcactgtgaatttccgcaag
ctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggacgatgatgtcatcttt
gagaagaagcagaaagagctggacgctgcagccacggaggagaaggatcgcctgaaggca
gagctggaggaggccaaagaccaggcgcggcggcggtcgctaggcaacatcaagttcatt
ggtgagctattcaagctgaagatgctgacggaggccatcatgcatgactgcatcgtcaag
ctgctgaagaaccacgacgaggagtcactagagtgcctctgtagactcttgtcaactata
gggaaggacctggactttgaaaaggcaaagccacgtatggaccagtactttgcccagatg
gacaagatcatcaaggagaagaagacatcgtccagaatccgcttcatgctgcaggacgta
ctggacctcaggaggaacacgtgggtccccaggagaggagagcagggccccaagaccata
gaccagatccacaaggatgctgagctagaggagcacagggaggttctcaaggtgcagcag
caactcctcaaccagaacacacgaggaggagttggaggacgtggtggtggaggaagagat
caggggagccgcgggggccaacacccccagacgggccaaaggagtcagccccaggacgag
ggctggaacacagttcccatctccaccaagagcagacccatcgacaccagccgactcagc
aagatcactaagcccggggctttggacttcaacaaccagctgctggcgccccagctcggg
ggtaagggcatgtggggcagctggggcaagggcagcagtggaggcaccaccggagccaaa
cccgctggtgaagccaccccagagtcaggaggccgcccagccaccagcaccctcaacagg
ttctcagcattgcagccacagcagccctcctccgcagggccctcacatgactcggacaga
agagttcctcagaggaacagctcgagccgggaccgtggcagcgacagattcgagcgtcat
gaccgtggcagcaacgaccgcttcgacaggcgggatgaccggcgagacgaccgggacagg
aaccggcccccggtcaccaagcggagctttagcagggagacggaggagcacagcagagag
agggagcacagcggccctgctgatcctgtacgccgtgtagccagcatgaccgatgaccgg
agcagcagagaccgagccaggagcaaagacaatgtgaagagggaagctactctgaccccc
cctcctgcccagaacaaacctgccttgagtgaagaaatgctggaaaagaagtccacagct
atcatagaggagtacctacacatcaacgacatgaaggaggcgctgcagtgtgtagtggag
atgaacagcaccccgctgctctttgtatttgtacggagtggtctagagtccactctggag
cgcagccccatcgtcagagaacgcatgggcctgctgctgcaccagctgtacaaggcaggg
accctgcccaaagagcagtactacagagggcttcaagagatactggaggtggcggaggac
atggccatagacgtcccccacatctggctctacctggctgagcttattacccctatgctt
cacgaaggaggcatccccatgggacagctcttcaaggagatatccaagcccctggttcct
caggggacggctggagttctgctggtccagatcctcaccttactctgcaaaggaatgagc
cataaaaaggcaggcgccatgtggagggaggcggggcttagctggaaagactttctgcct
gaggacgaggacgtcaacaagtttgtgacagaaaagaatgtggagttcaccctgggagga
ggaggagatgatgagaagagcagtaagaaagagctgagctcagaggagctgaacaaacag
ctggatagactcatacaggacaaggctgacaaccagaggatctatgattgggtcgaggct
aacctggacgagacgcagatgtcctccaacatgtttgtcagagcagtcatgacatccatc
tgccagtcagccatcatctgtgagaacccttacaagttggatgcgaaggtgatcacccgg
agggccaagctgctccacaagtacctgaaggatgagcagaaggagctgcaggctctctac
gccttgcaggccctcatggtggagatggagcagcctgccaacctgctgcggatgttcttt
gacacgctgtatgatgaggacgtgatcaacgaagaggccttcaacaagtgggagtccagc
aaggaccccgcagagatgcagggtaagggtgtggccctgaagtccgtcaccgccttcttc
acctggctccgtgaggccgaggacgaggagtctgacaacaacagctag
DBGET
integrated database retrieval system
