Oncorhynchus nerka (sockeye salmon): 115136651
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Entry
115136651 CDS
T07952
Name
(RefSeq) tsukushin-like isoform X1
KO
K08130
tsukushi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115136651
Proteoglycans [BR:
one00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
115136651
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
LRR_RPS2
LRR_NXF1-5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
115136651
NCBI-ProteinID:
XP_029528106
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Position
LG11:5565101..5573129
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AA seq
373 aa
AA seq
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MIHFSGTTRMSLTVSEKSAGCKSTMAFPLCVSLWMLLAVHCQGRAVKNCHPSCHCEVESF
GLFDSFSLTRVDCRGVGTSPIPIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSN
NRISMVSPKALSRLRYLESLDLSHNSLEALDEGCFSGLPLAEVDLSHNHFREFDLDMFIT
KGHGEPINVDLSHNQLTVVSRSSSKSPLLHVQSLTLAANQLRAVPKLKGIPLRDLSLDGN
SISHVEEGAFEDLKDLVHLSLSALPELFDIQPNSFRGLQNLQVLDLSNNAKLKALSPAVF
SGLVSLQELNLSNSGVTSLPNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKH
DEMLTCDVEGVIS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgattcatttctcaggtaccacacggatgagtttgacggtctcagaaaagtcggcaggc
tgcaagagcacgatggcgttccccctgtgtgttagtctgtggatgctcctggctgttcac
tgccagggtagagctgtgaagaactgccacccaagctgccactgtgaggtggagagcttt
ggcttgttcgacagcttcagcctgaccagggtggattgcaggggagtgggcaccagtccc
atccccatccccctggacactgcccacctggacttgtcctccaactccatgtccttgctg
accgacactatgctctctggacctggctataccaccttggtcagcctggacctcagcaac
aatcgcatatccatggtcagccccaaggccctgtccaggctgcgctacctggagtctctg
gacctcagccacaactccctggaggccctggatgagggctgcttctctggcctccctctg
gctgaggttgacctcagccacaaccacttccgggagtttgacctcgacatgttcatcact
aaaggtcacggagagccaatcaacgtggatctgtcccacaaccagctgacggtggtctcc
aggagttcctctaagagccccttgctacatgtccagagcctgactctagcagccaatcag
ctgagggccgtgcctaagctcaaaggcatcccgttgagggacctaagcctggatgggaac
agtatctcccacgttgaggagggggcctttgaggacctcaaggacctggttcacctatcc
ctcagtgcgcttcctgagctctttgacatccagcctaacagtttcagaggccttcagaac
cttcaggtcttggacctgtccaacaacgccaagctaaaggcactgagcccagctgtgttc
agtggacttgtgtctctacaggagctcaatctgtccaactctggagtaacgtcattgcca
aataacatgctaagtcacttgccaagcatcaagagtatcaccctgggccagaatatccat
tgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaacagaaacat
gacgagatgctaacctgtgacgttgaaggggttatctcatga
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