Oncorhynchus nerka (sockeye salmon): 115136683
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Entry
115136683 CDS
T07952
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115136683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115136683
03036 Chromosome and associated proteins [BR:
one03036
]
115136683
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
115136683
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115136683
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115136683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_2
Zf-C2H2_ZNF451_C
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
115136683
NCBI-ProteinID:
XP_029528197
LinkDB
All DBs
Position
LG2:complement(25400800..25417185)
Genome browser
AA seq
1565 aa
AA seq
DB search
MWDTEEGPNEEDERLSQSPGPSKGTRESSPMGRNGLSQAQFISAAMRGEAEEEEDEEEDP
GDQQQPLSLTQQSAQSATEAEPEERSEQPDLPLSHSSPVEEGPGSLQHDTETASPLPRAE
PEADPDPDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIHATANQQTHTFKCRYCGK
SFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLTPLGQAGGSSPDCGTVSGHYVVRG
SPVPGGPMGSLEVVRKDPVAESDRPFIVDENGETKELHPCKYCNKAFGTHTNMRRHQRRI
HERHLLPKGVRRKGMLLQENPSQQQLHHLPEQSPSISPPLVYVPSADTEDEGDREEYLVD
IANNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDAVVISPNQISQALKVDTR
TCAVRQVSNLGQPMSKRRTSTPPLMPSLKMETETGSSSASSSSSTSSSSALLVGSVFRQS
SDSLAFQKEKTIYLSPKLKQLLQTQTDSQKPAIALIAERHRLAPPLSVTSLPAASGRFKR
RTASPSSSPQLSPALKANGCKNEAGVSSYTLKVPNLETLGMSPAWSLSSKEERDTLSPSG
KNGCSWSASRTGGNSCNQQPLDLSSCISKRRDSFNKTPGEVVLDLSMSRKSTAESKGSPS
PAQPPTKKKKPNTSMLEKVLMNEYAGLNPAEEEGSSPLGSPDSQYTAGSGTGTASHSPSS
NLPFESAHPSPPSLTPVTMNPSSPCGSSLTSPTPPPPVLPTMPSPDGPTLINSLPVLSHK
MSPRSIDQGEDEPVCVSNSTTAETMLAAVSNIYGDEEHINKPIDSNPDPLTREAISSPST
EPSLVSDAVALSLSSTQSKPARTGNQLDVQVNQDLEPIITEGQEKSQCSELPVLSSVTES
LLSASSTSPAAISDIPAPPAVSPPSLSSTVIKGDPQRSEQLADLVLSPSGTWSSPLSAAA
DKPSSLSGEEEGSPPEPFSKSFVCNVCEDPFRAIKELSRHILEHAAEWPYKCEFCVQLFG
NAPALLEHRTALHGVGRVFVCSVCSKEFAFLCNLQQHQKDLHPSQLCTHTAVEKGKPRPQ
NYTDPARAKEESNPSSTVATGPESSPEVASSQGVSDVKKEEPDTNGKHEEDGLEDLTEEL
YTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAAGSVASATHFTTHNIPQT
FSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQIVKPQNGSLSPAS
AANAGHNAFRRMGQPKRLNFNQEPLGKTKMSSLGKKKSQLVQKAIGQRNETAATVNKAPS
QVKQEEPQEQEVHVCPHCSREFTYPASLNKHIAGSCPMKPVSKKAKKGAATEATPAVDKN
MSLRRRTTDSEIQQPEPTEPVPKTLSKTRARNSGPGPAEAEAPPPVGKGKMAATQVCTKR
PASFPAATVSLGKKSKKGKVQSLPPTPLPSESPSDSALRPAAQTKQRMGKEVPPKKGAEV
KSPPQQQSQVPPKKEGERFSLRARERAVGPVTRSLQMANTAAPVEVKTDDLSSQEPEETQ
EYLLK
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacacagaggaaggtccaaatgaggaagacgagagactctcccaatcaccaggg
ccttccaaggggactcgggagagctcccccatggggaggaacggcctctctcaagcccag
ttcatctcagcagcaatgagaggggaagcggaggaggaggaggatgaagaggaagaccca
ggggatcagcagcagccgctgtcactgacacaacagagtgctcagtctgctactgaagct
gagccagaggagaggagtgagcagcctgatctgccactaagccatagcagcccagttgag
gaggggcctgggagccttcagcatgacactgagactgcctcacccctaccaagggctgaa
ccagaggcagaccctgaccccgaccctgacctggaaggtgacccccacggagaggagtcc
cacccctgccagcactgcgagcgccatttctccaccaaacagggcctggagcgccacaca
cacatccatgccaccgcaaaccagcaaacgcacacgttcaaatgccgttactgtggcaag
tctttcggctcgcaggtggggcgtcggcggcacgagcgaaggcatgagaacgggccaaaa
aacaaaggccaacggcctggctcactagctgggactgctactttactcactcctctgggg
caggctggtggttcgagcccagactgtggcactgtctctggccactatgttgtcaggggc
tcccctgtccctggaggacctatgggcagccttgaggttgtgaggaaggaccctgtggct
gagagtgaccggccatttatcgtggatgagaatggtgagacaaaggagcttcatccctgc
aagtactgtaataaggctttcggcactcacaccaacatgcgcagacaccagcgcagaatc
cacgagcgccacttactgcccaagggtgtccgcaggaaaggcatgctgctgcaggagaac
ccatctcagcagcagctgcatcatctgcctgaacagtcccctagcatcagcccacccctc
gtctatgtgcccagtgcagacactgaggatgagggggaccgagaggagtacctggtcgac
atagccaataacatctctgagaatctcagcctgtacatcgacggcaagatcctgtccact
agttcagtcagcggctgtgaggtgatcgaagtggactccagttctgcagcactgtttggt
ctcgacgcagtggtcatcagccccaatcagatcagtcaggctctcaaagtggataccagg
acatgtgctgtgaggcaggtctcgaatctcggccagcccatgtcgaaaaggagaacgtcg
acacccccgctcatgccaagtcttaaaatggagactgaaactgggtcctcttccgcctcc
tcttcctcctccacgtcttcctcatccgccttgttggtgggaagtgtcttccgtcagtcc
tcagactcattagcatttcagaaggagaaaactatctatctgtctcctaagctcaaacag
ctcctccagactcagacagacagtcagaaacctgccattgccctgatagcagagaggcac
agattagctccccctctctccgttacgtctctgcctgcagcctcaggcaggttcaagaga
agaacagcttccccctcctcatctccacagctcagccctgcgctgaaagcaaacggctgt
aagaacgaggcgggggtctcgtcgtacaccctcaaggtgccaaatctggagaccctgggc
atgtcccctgcctggagtctgtccagcaaggaggagagggacacactgagtcccagcggg
aagaacgggtgcagctggtctgcctctcggactggagggaactcgtgtaatcagcagccc
ttggatctgtccagctgcatcagtaagaggagggacagcttcaacaagacgcccggggag
gtagtgctggatttaagcatgagtcggaagagtacagcagagtctaagggaagtccatct
ccggcacagccccccaccaagaagaagaagcccaacaccagcatgctagagaaggtgttg
atgaacgagtacgccggcttaaacccagcagaagaggaaggctcttctcccctgggaagc
ccagattctcagtatactgcaggcagtggtacaggtaccgcatctcacagtccctcttcc
aatctgccctttgaatcagcccatccctctcccccctctctaacgcccgtcacgatgaac
ccctcctccccttgcggctccagcctgacctctccaactccacctccccctgtcctaccc
accatgccctcaccagacggccctacgctcatcaactctctccctgtcctctcccacaaa
atgtcccccagatctatcgaccaaggtgaggacgagccagtttgcgtatcgaactctacc
acagcagagacaatgttagctgcagtaagtaacatttatggagatgaggaacatatcaat
aagccaatagactctaatccagatccccttaccagggaagctatttcaagcccctctacg
gagccctccttggtatctgatgctgtcgctctgagtctgtcctcaacacaatcgaaacct
gctaggactgggaaccagctggatgtccaagtgaatcaagacctggaaccgattattact
gagggacaggagaaatcccaatgctctgaactccctgtattatcatccgtaacagaatcc
ctcctctctgcctcatcgacctcgcctgctgccatatcggatatcccagctccaccagcg
gtctccccgccatctctctctagcactgtgattaaaggggatccccagcgcagtgaacag
ctggctgacttagtcctttctcctagtggcacatggtcttcacctctgtctgctgctgct
gacaaaccctcgtcgttgtcaggggaggaggagggatcgccgccagagcccttcagtaag
agctttgtgtgtaatgtatgtgaggaccccttccgcgccatcaaagagctcagtcggcac
atcctagagcacgccgctgagtggccctacaagtgtgagttctgcgtgcagctgttcggg
aatgcccctgctctgctggagcaccgcacggctctccacggcgtgggacgcgtctttgtc
tgctccgtctgctccaaggagttcgccttcctctgcaacctccagcagcaccagaaggac
ctgcatcccagccagctgtgcactcacacagcggtggagaaaggcaagcccaggccacag
aactacacagacccagccagggccaaagaggagagtaacccctcctcaaccgtagccaca
gggcctgagtcctctcctgaagttgcttcctcccagggggtctctgatgtgaagaaggag
gagcctgatactaacgggaagcatgaggaggatggactggaggacctaactgaagagctg
tacactactataaagatcatggcctctgagggaggcaagcctaaaggcccagacgtacgc
ctgggcattaatcaacactaccccagtttcaagccaccccccttcccctaccacaaccgc
actgctgcaggctctgtggcctcggccacccacttcactacccacaacatcccccagaca
ttcagcactgccatccgctgcaccaaatgcggcaagagtttcgacaacatgcccgagctg
cacaagcacatactagcctgtgccaacgccagtgataagaggcggtacactcccaagaag
aaccccatccctctgagacagatagtgaagccccagaacggctctctgtcgcctgcctct
gctgccaacgcagggcacaacgccttccgcagaatgggccaacccaagaggctcaacttc
aaccaagaaccgcttggcaaaaccaagatgagttccctcggtaagaagaagagccagctg
gttcagaaggccatcgggcagaggaatgagactgcagctactgttaacaaggcccctagc
caggttaaacaggaggagccgcaagagcaggaggtccacgtatgccctcactgcagccga
gagttcacctaccctgccagcctcaataaacatatagcaggcagctgtcccatgaagcca
gtctctaagaaggccaaaaaaggagccgcaacagaggcaacaccagctgtagacaaaaac
atgagccttcgacggagaaccacagactctgagatccagcagccagaaccgactgagccg
gttcccaaaacgcttagcaaaactcgggctcgcaactctggacctggccctgcggaggct
gaggccccaccaccggtaggtaaaggaaagatggctgccacacaggtgtgcaccaagagg
ccagcctctttcccagcagccacagtttctctcggcaagaaaagtaaaaaaggcaaagtt
caatcgttaccccccaccccgttgccctccgagagtcccagtgactctgcactgcggcca
gcagctcagacaaagcaacgcatgggcaaggaagtgccacccaagaagggagcggaggtg
aaatcgcccccacagcagcagtctcaggtgccgcctaagaaagaaggggaacggttctct
ctgagagcgagggagcgagctgtcgggccggtgacccggagcctacagatggccaacact
gcagctcctgtggaggtgaaaacagatgacctctccagccaggagcctgaagagacccag
gagtacttgctgaagtga
DBGET
integrated database retrieval system
