Oncorhynchus nerka (sockeye salmon): 115136687
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Entry
115136687 CDS
T07952
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136687
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
DSCAM family
115136687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
Ig_C17orf99
C2-set_3
fn3_2
DUF4446
DUF6249
Motif
Other DBs
NCBI-GeneID:
115136687
NCBI-ProteinID:
XP_029528214
LinkDB
All DBs
Position
LG11:complement(7857481..7999245)
Genome browser
AA seq
2029 aa
AA seq
DB search
MWIFAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATEEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFHQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLLVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVPVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDNHHHPGHYETNEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLSVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIDLHPSSTYNIR
IFAKNDIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWKAPNKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGDSSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDIPGPPAGVKAA
ASTSSVVFVSWLPPLKLNGIIRKYIVFCSNHPTVMSEFEASPDVYFYRVPNLARNRKYSI
WVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMRDIILPCKAVGDPPPTIKW
LKGNNGTPAPVLIDGRHSVHSNASFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLE
NLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIGW
NNGGCPITSFTLEYHPMDTATWTTAQRTSLTKSYILYDLAEATWYELQMKVVNSAGSAEK
KIMFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKRR
RREQRLKRLRDAKSLAEMLMSKNTRIPDTSNKQQTMRMHIDIPRAQLLIEERDTMEIIDD
RSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAGP
AASRNRYASQWTLNRPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLA
SSTPSESGICRFTASPPKPQDISRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGSVSG
GRGSNGGNGGGEAGALGQACLEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLP
QREPTGREATGDLAQAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcagttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccccgcctcgctgcgctggtatctg
gccaccgaagaggagatctacgatgtgcctgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctgatccatgacaatacctac
tattgcacagctgaaaatccttcagggaaaataagaagtcaagatgtccacattaaggcc
gtatttcgggaaccctacaccgttcgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggacgtccagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatccc
actaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtagagctgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccaccagagtgtcacaggcttgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaggtgtggaacagctatggc
aacgctgaggtggttggccggctgcttgtcaaacagcccctgaaggcagtggtcagccca
cgaaaggtgaagggcagcgtggggagtaaggtgtccttgcattgcagtgtcagtggctcg
gatgagtacgagctgtcgtggtaccgtaacggagagatcatctaccccggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgacgga
ggggcctaccaatgtttcgccaggaagaacaaaatgtccgctcaggattttgttccggtc
atcttggaggacggcactccgaagattctgtcctccttcagtgagaaggtggtcaacccc
aacgaaccggtcttcctggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacaaccaccaccaccccggccactacgagacc
aacgagggccacgtggtcagccagctgaacatcactcacactaaggaggtggacggaggg
gtgtatcgctgcacctgcaggaactcggccggggcggtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacggccatcgcagggcgggac
gcgtacgtccactgtcgcgttattggctacccgtattattccatcaagtggtataagaac
tcccacctgctccccttcaaccacaggcagagggcttttgagaacaacggcactctgaag
ctgtctaacgtgcaggagctggaccagggagagtacaattgcagggtattggtcaaacct
caccaagagaccaatcagagcgtccatcttagtgtcaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggccagcgtgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacatggcagaaggacgggcggccaatccctgccagtctg
ggggtcaccattgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcgcgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgaccctcaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactccaaaggtaacggggttccccagttccagcccatcgccctgaactct
ggctcccgtatccagctgctggtcaatggctctctgctaatcaaacacgtgctagaggag
gacagcggctactacctgtgtaaggtcagcaacgatgtgggagctgacgttagcaagtcc
atgtacctcaccgtcaaaatcccagccatgatcacgtcgtaccccaacacgaccatggcc
acggtgggccagcagaaggagatgagctgcacggcccacggggagaagcccatcatggtg
cgctgggagaaggaggaacgtatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccactgttcgggaagat
tctggattcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccagaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggcttcgacggaaacagccccatcacaggatatgac
attgagtgcaagaacaaatcagcctcgtggaattcagcccagataacaaaagacgtgtcc
ccccagctgaaccaggccaccattatagacctgcacccctcctccacctacaacatccgc
atttttgccaagaacgacatcggcaagagcgataccagcaacgagctcactatcaccact
gacgaagcagcccccgatggccctccacaagaagtacaactggaggccacctctccacaa
agcatcaaagtcacatggaaggcccccaacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggacagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtacggggtggtggtgcaggcggctaaccgtgcaggcaccgggccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaagtctccagaagtcatctctctttcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaatctgccagatggagagttggga
gagatcaggaacgtaaccacctcctacccatctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtgcgcagcgag
cagatcttcacccggaccaaggaagacatccctgggcctccagcgggggttaaggccgca
gcctccaccagctccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
attaggaagtacatcgtcttctgctccaaccaccccactgtgatgagtgagtttgaggct
tctcctgatgtatatttctacagagtgccaaacctggcccgcaacaggaagtacagcatc
tgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtggaa
cctcgggccaaagctccggccaggatcctgacgttcaacggaacagtgactacaccctgg
atgagggacatcattctgccctgcaaggcggtcggagatccaccccccaccatcaagtgg
ctgaagggaaacaatggtacccctgctcctgttctgattgacggacgccacagtgtccat
agcaacgctagtttcatcatccggacggtgaaagcagaggactctgggaactacagctgt
gtggccagcaacaactggggctctgatgaaatcacgctgaacctgcaggttcaagttcct
ccagaccaaccacgcctcacagttaccaagacaactaccacgtcaatcactctgtcctgg
atacctggggacaatggaggaagctccatcagaggctacatcctgcagtactcagaggac
aactctgagcagtgggggagctttcccatcagccctagtgagcggtcgtaccgtctggag
aacctgaagtgtggcacctggtacaagttcaccctgactgctcagaacggagtgggcccc
ggacgcatcagtgagatcattgaagcaaagacccacggaaaagagccccagtttgccaaa
gaacatgagctgtttgccagcatcaactccacccgggtcaggctcaatctaattgggtgg
aacaatggtggctgcccaatcacctcgttcaccctggagtaccatccgatggacacggca
acgtggaccacggctcagcgcacctccctaaccaagagctacatcctgtatgacctggcg
gaggcaacctggtacgagctgcagatgaaagtggtcaatagcgccggctccgctgagaag
aagatcatgttcgccacgctcaacgccgatggaagcaccatccctcctctgttgaagaca
gtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgaccatc
acctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagaggagg
aggagggagcagaggctcaagaggctacgcgatgcaaaaagcctggcagaaatgctgatg
agtaaaaacacacggataccagacacatccaacaagcagcagaccatgagaatgcacatc
gatatcccccgagcccagctgctcatcgaggagagagatactatggagattattgacgac
aggtcgacggtgctgctgactgataatgactttggggagacgtccaaacagaagtcgtcc
acggtcacgcacacagtccactaccagtccctgtcgcaggccaccggtccactggtggac
gtctccgacgcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggccct
gcagccagcaggaaccgctatgccagccagtggactctgaaccggccacaaccacccacc
tcctcccacaccctgagcacagactggagactgcccacaccgcgtgctgccggctctgtg
gacaaggagagcgacagctacagcgtcagcccatcgcaggacacagaccgtgcgcggagc
agcatggtgtcgacggagagcgcgtcgtccacgtacgaggagctggcccgggcctacgag
cacgccaagatggaggagcacctgcggcacgccaagttcactatcacagagtgcttcatc
tccgacacctcctcggagcaaatgacggccggcaccaacgactacacagacagcctggca
tctagcacgccgtctgagtcaggcatctgcaggttcacagcctccccgcccaagcctcag
gacatcagccgggtcatgaacatggccgcaccaaaggcccacagaccgggtggagagctg
gtgcacctgcccccgtacctacgcatggacttcctgttaaaccgtggctctgtgtcggga
ggccgggggtccaacggtggtaacggaggaggggaggcaggggcgttgggccaggcgtgt
ctggagccccagaagagccgcaccctgaaacggcccccgctcctggagcccacacccatg
gaggtgcccacgtccagggaggtgcagcagtggcagccagggactgcctccaccctgccc
cagcgtgagcccactggccgtgaggccaccggagacctggcccaggcacaggccgccaag
ctcagtagctcacaggagtccctgctagattccagaggacacttaaaacagagcaacaac
ccctacgcaaagtcctacacactggtataa
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integrated database retrieval system
