KEGG   Oncorhynchus nerka (sockeye salmon): 115136716
Entry
115136716         CDS       T07952                                 
Name
(RefSeq) cell adhesion molecule 1-like isoform X1
  KO
K06781  cell adhesion molecule 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115136716
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:one04515]
    115136716
Cell adhesion molecules [BR:one04515]
 Immunoglobulin superfamily
  Nectin family
   115136716
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig C2-set_2 V-set C1-set C2-set_3 KOW2_Spt5 Syndecan
Other DBs
NCBI-GeneID: 115136716
NCBI-ProteinID: XP_029528285
LinkDB
Position
LG11:complement(8877724..9031821)
AA seq 421 aa
MAITGNGSLTISLSVFVISAAFLLKGAAETLSVEGQNLGTDNVSVIEGEMATISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGSPIMDSQEDVVSEGNETELTCTAMGSKPAASIRWMKGEQELTGK
MTVDETYDGMFTVTSRLRLTVSKEDDGAPVSCIIDHPAVKDLRAQRYLEVLYQPEVKIVQ
AFPEGLTREGENLELTCIAKGKPQPHQISWLRVDDDVPSHTVITGSDLFIENLNKSYNGT
YRCVASNAVGEAYDDYILFVYDAPTTIPAPTTLNLDNTQDSRAGEGAPQKIDHAVIGGVV
AVVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTEEKKEYY
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgatcacgggaaacggatctctcactatttctctctctgttttcgtgatttcagca
gcgtttcttctaaaaggagccgctgagaccttgtcagttgaaggtcaaaacctggggact
gataatgtatcagtgattgagggagagatggcgaccatcagctgcagggtgaagaacaat
gatgactcagtcatccagctcctcaaccccaacaggcagaccatctacttcagagacgtc
agacccctgaaggacagccggttccagctggtgaatttctccgacaacgagctgcgggtg
tctctgtccaacgtgtcactgtcagatgagggacgctatgtgtgccagctctacacagac
cctcctcaggaggcctacgcagacatcactgtgctggtcccaccaggcagtccaatcatg
gattcccaagaggatgtggtcagtgaggggaacgagacagagctcacctgtacagccatg
ggcagcaagcctgccgcctccatcagatggatgaaaggagagcaggagctgacaggcaag
atgacggtggatgagacctacgacgggatgttcacagtcaccagtaggctgagactcacc
gtgtccaaggaggacgacggagcgccagtcagctgcatcatcgaccacccagccgtgaag
gacctccgggcacagagatacctggaagtgctatatcaaccagaagtgaagattgttcag
gcattccctgaaggtttaacgagagagggagagaatctagagctgacgtgcatagcaaaa
ggcaaaccacagccccatcagatcagctggctcagagtggatgatgatgtgccgtctcac
accgtgatcaccggctctgacctcttcatcgaaaacctcaacaagtcgtacaacggcacg
taccgctgtgtggcctccaacgccgtgggagaggcctacgatgactacatcctctttgta
tacgatgctcctaccacgatccccgcacccaccaccttgaacctagacaacacccaagac
tccagagctggcgagggggcgccacagaagatagaccacgctgtcatcggaggcgtggtt
gccgtggtgatgttcgctatcctctgtgcactcatcgtcctggggcgctacttcgccaga
cacaaaggcacctacttcacacatgaagccaaaggggcagacgacgcagcagatgcagac
acggccatcattaatgcagaggggggacacaacaacacggaagagaagaaggagtactac
atctaa

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