Oncorhynchus nerka (sockeye salmon): 115136724
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Entry
115136724 CDS
T07952
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136724
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115136724
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
SALM family
115136724
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115136724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
fn3
Ig_2
ig
LRR_5
LRR_9
Ig_DSCAM-DSCAML_C
DUF4834
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
115136724
NCBI-ProteinID:
XP_029528311
LinkDB
All DBs
Position
LG11:complement(9293407..9353306)
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AA seq
769 aa
AA seq
DB search
MERLVVCVLLCVLLCAVLVKGYNCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVEL
RLTDNFITIIRRKDFFNMTSLVHLTLSRNTISQITPHAFLGLRSLRALHMDGNRLSVIKS
DHFKGLVNLRHLILGNNQIHHVAPTSFDEFVSTIEDLDLSNNNLRTLPWEEIGRMSHINI
LTLDHNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSNPSSLAV
SFGGNPLHCNCELLWLRRLTRHDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKNLST
KPYVMEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNSRTILYDNGTLDILITTLKDSGA
FNCVASNAAGIATAAVEINMIPLPLFVNNTLHHMREADRGLSDITTSSKSGNDTKGHDKH
QDRRVVVVELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKTFLINDL
AAGREYDLCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFIHSQFLGGTMIIIIGGI
IVASVLVFIIILMIRYKAHSSPEDSKVKVSSSMHSQTNGSQHRLQRSTSKQPAEDSHQRE
AQPVAAKECMALVLKVDSDKREWDTPLATTAILEVELPPLPTDKVRRTSLDAQRSGSGPP
SEDTQTESSPMGSTISLCLLGPNASTKEAPRLKDKSTLANMGFNNELARTRHRFSFDGGD
YSIFQSHSYPRRARTRRHKSTNQLNVESSPLANRRVIFSSTEWMLESTV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctggttgtgtgtgtgctgctgtgtgtacttctatgtgcggtgctggtgaag
ggctacaactgccccggccgctgcatctgccagcacctctcccccactttgactctgctc
tgtgctaagactggtctgttgtttgtgcccccaaccatcgaccgcaagaccgtggagctg
cgcctcacagacaacttcatcaccatcatccgcaggaaagactttttcaacatgaccagc
ctggtccacctcaccctgtcccgtaacaccatcagccagatcacgccccatgccttcctg
ggcctgcgctctctacgagccctccacatggacggcaaccgcctcagtgtcatcaaaagc
gaccatttcaaaggcttggtcaaccttcgccacctcatactggggaacaaccagatccac
cacgtggcccctacctcctttgatgagtttgtgtcgaccatcgaggacctggatctgtcc
aacaacaacctgaggaccctgccctgggaggagataggcaggatgagccacatcaacatc
ctcacccttgatcacaacctgatcgatcacatcggagctgggactttcacactcctcacc
aagctggttcgtctggatatgacctccaaccggctgcagaagctacctccagacagcctg
tttcagcacgcacaggtgctgtcagacgccaagggctccaacccgtcttccctggcagtg
agcttcggagggaaccctctccactgtaactgtgagctgctgtggctccgcagactgaca
cgacacgacgacctggagacatgcgcctccccggagcacctcatggacaagtacttctgg
tccatccaggaggaggagttcatctgcgagcccccgctcatcaccaagaacctatctacc
aagccctacgtcatggagggccagggggtcaccctcaagtgcaaggccatgggagaccca
gacccggccatccactggcgcttcccagatggcaagctggtgcataacaactcccgcacc
atcctgtatgacaacggtaccttggacatcctcatcaccaccctaaaggacagcggtgcc
ttcaactgtgtggcctccaatgctgcaggcatcgccacagctgccgtggagatcaacatg
atccctctgcccctgttcgtaaacaacacattgcatcacatgcgcgaggctgatcggggc
ctctctgacatcaccacctcctccaagtcaggcaacgacaccaagggccatgacaagcac
caggacaggagggtggtggtggtcgagttgacctcctcctcggctgtgattcgctggccc
tccgagcgccacatcccaggcatcaggatgtaccagattcagtacaacagcactgcagac
gacacactggtttacagaatgatcccgtccaccagtaagaccttcctgatcaacgacctg
gcggcgggccgggagtatgacctgtgtgtcctggcggtgtacgacgacggcatcacctct
ctgacggccacgcgcgtggtcggctgcgtccagttccacacagccagcgaggtcagccag
tgtcgcttcatccacagccagtttctgggcggcaccatgataatcatcattggcggcatc
atcgtggcttcagtgctggtgtttatcatcatcctcatgatccgctacaaagcccacagc
agccccgaggacagcaaggtcaaggtcagctccagcatgcactcccagaccaacggcagc
cagcacagactccagcgctccacctccaaacagcctgccgaggacagccaccagagagaa
gcccaaccggtggcagccaaggagtgcatggccctggtgctgaaggttgacagtgacaag
agggagtgggacactcctctggccaccacggccatcctggaagtggagctgccccccctg
cccacggacaaggtgaggaggaccagcctggacgcccagcgctctggatctggccccccg
tcagaggacacacagacagaaagcagcccgatgggctccaccatatccttgtgtctccta
ggtcccaacgccagcaccaaggaggcccccaggctcaaggacaagagcaccctggccaac
atggggtttaataatgagctggcacgaactaggcacaggttcagctttgatgggggagac
tactccatatttcagagccacagttacccccgcagagcgcggacgaggcggcacaagtct
acaaaccagctcaacgtggagtcctcaccgctcgccaaccggagagtcattttcagcagc
actgaatggatgctggagagcacagtgtaa
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