Oncorhynchus nerka (sockeye salmon): 115136749
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Entry
115136749 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115136749
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115136749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115136749
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115136749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115136749
NCBI-ProteinID:
XP_029528357
LinkDB
All DBs
Position
LG11:10200884..10205812
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AA seq
252 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGVGGAPRGRYGPPSRRS
EYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTK
FRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRSGGTRGGRGSPR
YSPRHSRSRSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggccctgcaggaaataacgattgtcgtatttacgtcgga
aatctaccccctgatattcgcaccaaagatgtcgaggacgtgttttacaaatacggagcg
attcgcgacatcgacttgaaaaatcggagaggaggacctccctttgcctttatcgaattt
gaagatcccagggatgccgacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggcaggggtggggggagaggcggctttggt
ggtggtgggggggttggtggcgccccgagaggcagatacgggccgccatccagacgctcc
gagtacagggtcattgtctcagggcttccccagagtggcagctggcaggacctcaaggat
cacatgcgtgaggctggggatgtatgttatgctgacgttttcagagatggaactggggtt
gtggagtttgtgcgcaaagaagacatgacctacgccgttcgaaagctggataacaccaaa
ttccgatcacacgagggagagaccgcttacgttcgcgtgaaagtagatggtccccgcagt
ccgagctatggaagatcacgttccaggagccgcagtcgaagcaggagccgcagcgcagcc
agtcgcagccgcagcaactctcgcagtggtggtacccgtggtggcagaggatctcctcgc
tactctccacgccatagccgctctcgctcccgttcctaa
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