Oncorhynchus nerka (sockeye salmon): 115136751
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Entry
115136751 CDS
T07952
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115136751
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115136751
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Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
RHH_ERCC6L2
Motif
Other DBs
NCBI-GeneID:
115136751
NCBI-ProteinID:
XP_029528362
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Position
LG11:10251998..10279313
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AA seq
588 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLQMSPPSSKI
NGNDSKPVFLTLTNGHSKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQREEVDRI
LAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREVLRQFNQAVQGSDSNMTEKGSQDQVLFFFPEFNPPGQGMGQQGEEVGSEPSCKKM
RRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLV
TEVRVYNWFANRRKEEAFRQKLAMDTYPISTHSMNPLLSHSHNSPHHHSSQISASPPSKM
QVRYSQQGPGEVSSSTTISHHGSMATSQSVLQHVSPGGLDPSHSLLSPDAKMMSASGGGL
PPVSTLTNIHSSHHTHQQTQNLIMPLSGVMTIAQSLNTSQSVPVINSVAGSLAALQPVQF
SQQLHSPHQHGLMQQSPSHMNQQPFMATVTHSHSQYLPLMYPHKQEPPQYSHQSRFPSTM
VVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWVNTIFLVRSLNKIT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcgttggacgatatggaccccagc
ccgaatggctttggagttaagttggagaatctacagatgtctccgccaagttctaaaatc
aacggaaatgattcgaagccggtatttcttacgttgaccaatgggcatagtaagggcaaa
ctgtcgggagatgaggggtccgaggacggggacgatttcgataccccaccgatactgaaa
gaactccagtcacttaacaccgaggaagcagcggaacagagggaagaagttgaccgaata
ttagctgaggacccctggcgtgccgcccgaatgatcaaaggctacatgcaacagcacaac
ataccacaacgtgaggtggtggatgtaaccgggctaaatcagtctcacctctcacagcac
ctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctggtatgtc
aggaaacagcgggaagttctcagacaattcaaccaggcagtgcaaggttctgacagcaat
atgaccgagaaaggcagtcaggatcaggtgctgtttttcttcccagagttcaaccctcct
ggtcagggtatggggcaacaaggggaggaggtgggttcagaaccctcctgcaagaaaatg
agacggaaccgttttaaatgggggcctgcatcccaacagatcctctaccaggcctatgaa
agacagaagaaccccagcaaagaggaacgggaggcgttggtggaagagtgcaacagggcc
gagtgtcttcagagaggggtgtctccgtctaaagctcatgggctgggctctaacctggtc
actgaggtacgggtctataactggtttgccaaccggcgtaaggaggaggccttccgtcag
aagctggcgatggacacctaccccatatccacccacagcatgaaccctctcctgtctcac
agccacaactccccacaccaccacagctcccagatcagcgcatccccccctagtaagatg
caagtgcggtacagccaacagggacccggtgaggtcagctcctcgacgaccatcagtcac
cacggcagcatggcgaccagccagtcggtgttacagcatgtgtctccgggaggcttggac
cccagccacagtctgctgtcacctgacgccaagatgatgtctgcgtcaggtggaggcctg
ccacctgtgagcacgctgaccaacatccacagctcccaccacacacaccagcagacacag
aacctcatcatgcctctctctggagtcatgactatcgcacagagtctgaacacgtcgcag
tcagtgcctgtgatcaacagcgtggcggggagccttgcagcgctgcagccggtgcagttc
tcccagcagctccacagtccccaccagcatggcctgatgcagcagtcccccagccacatg
aaccagcagcccttcatggccaccgtgactcattcacacagtcagtacctgcctcttatg
taccctcataagcaggagccaccgcagtattctcaccagtcacggtttccctcaaccatg
gtggtgacagacgccaacagcctcagtactctcagctccatgtcatccagcaaacaggat
tctaccgtaaacaagatggtgcaactggggggtctctcctgggtaaatactattttctta
gtacggtcacttaataaaatcacttag
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