Oncorhynchus nerka (sockeye salmon): 115136805
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Entry
115136805 CDS
T07952
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
one03012
]
115136805
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115136805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
Rad60-SLD
ANAPC3
Motif
Other DBs
NCBI-GeneID:
115136805
NCBI-ProteinID:
XP_029528472
LinkDB
All DBs
Position
LG11:complement(12035476..12061586)
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AA seq
1450 aa
AA seq
DB search
MVSKTDDIHASVPNCNVNTVDLAEGETPDHQETKAPNKDPCACGHSASTVVMNGGGAHYH
SEEESKQDGGGDTDGVEDSNEQEVIVIQDTGFTVKIQAPGTEPFDLQVSPQEMVQEIHQV
LMDREDTCHRTCFSLQLDGNVLDNFAELKSIEGLQEGSLLKVVEEPYTVREARIHVRHIR
DLLKSLDPSDAYNGVDCNSLSFLSVFTDGDLGDSGKLKKKGSDLEQIDCTPPEHILPGSK
ERPLVPLQPQNKDWKVIMTPMQCLKVLTMSGWNPPPGNRKMHGDLMYLYMVTVEERHISI
TASTRGFYLNQSTTYTFNPKPANPSFLSHSLVELLSQISPAFKKNFTVLQKTRVQRHPFE
RIATPFQVYSWTAPQVDHTMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELARKN
LPERLLRERAIFKVHSDFAAAATRGSMAVIDGNVMAINPGEETRMQMFIWNNIFFSLGFD
VRDHYRELGGDAAAHAAPTNDLNGVRAYGAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGI
LEREQEQSVIYGSIDFGKTVVSHGKYLELLEKTSRPLKVQRHNVLNEKDESVELCSSVEC
KGIIGNDGRHYILDLLRTFPPDLNFLPVEGEELSPESVRQGFPRQHRHRLACLRQELIEA
FVEHRYLLFMKMAALQLMQQKANKESKMANLTENNSPEAAVPALPSTENPDASAKSTETL
TDGKSDAVQIETTSTSDAPQPAATEATTTEAAPKAEQTTETDIPSAAATTVTASQATPTE
DNVVPTVTTNGPLVPVATAIQNGECESPLEGKAEDSIPGLAQAKELAESLAAEDGSGIDP
KSREVVLNACKAVGSISNTSFDIRFNPDIFSPGVRFPEDSVDDIQKQKQLLKDAAAFLVS
CQIPSLVKDCLDHSALPMDGATLTEALHQRGINVRYLGNVLEFVDKTPAKAQLEHFYRIG
ISELITRCAKHIFKTYLQTMYSISQGVELSALSAAVSHFLNCFLSSFPDAVAHLPADELV
SRRKNRKRRNRVPGGGDNTAWASLTPSELWKNIVSEAQSYYNFTLHCENADQVVEKYGLQ
KITLLREISIKAGIQILIKEYNFDSRHKPAFTEEDILNIFPVVKHVNPKASDAFHFFQSG
QAKVQQGYLKEGCELINEALNLFNNVYGAMHVEICACLRLLARLNYIMGDHHEALSNQQK
AVLMSERVLGVEHPNTIQEYMHLALYCFANGQLSTALKLLYRARYLMLMVCGEDHPEMAL
LDSNIGLVLHGVMEYDLSLRFLENALAINSKYHGPRSLKVALSHHLVARVYESKAEFRSA
LQHEKEGYTIYKNQVGEAHEKTKESSEYLKYLTQQAVALQRTMNEIYKNGSNASIMPLKF
TAPSMASVLEQLNIINGIIFIPLSQKDLENLKAEVQRRQQLQESGKSMEELTVDGPLELE
DKIPMDVNVD
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaagacggatgacatccatgcgtcagtacccaactgtaatgttaacacagtt
gatcttgcagaaggagaaacgccagaccaccaagagaccaaggcaccaaacaaggatcct
tgtgcgtgtgggcacagtgcaagcacagtggtgatgaatgggggcggggcccactatcat
tcggaggaggagtccaagcaggatgggggtggtgacacggacggtgtggaggattctaac
gaacaggaagtgattgtgattcaggatacagggttcaccgtgaagatccaggcacccggg
acggagccttttgacctccaggtttcaccccaggagatggtgcaggagatccaccaggtg
ttgatggaccgtgaggacacctgtcatcgtacctgtttctccctgcagctggacggcaac
gtgctggataactttgctgagctcaaatccatcgagggcctgcaggagggctcccttctc
aaagtagtggaagagccctacacagtgcgcgaggcccgtatccatgtgcgtcatatcaga
gacctgctgaaaagcctggacccatctgatgcctacaatggagtggactgcaactctctc
tccttcctcagtgtcttcaccgacggggacctaggagacagtggtaagctgaagaagaag
ggcagtgatctggagcagatagactgtacccctccagaacacatcctgcctggcagcaaa
gaacgccccctggtgcccctccagccacagaacaaggactggaaggtaataatgacgccc
atgcagtgcctgaaggtcctgactatgagtggctggaaccccccccctggcaacaggaag
atgcatggtgatctgatgtacctgtatatggtgactgttgaggagagacacatcagtatc
actgcctccacacgtggcttctacctcaaccagtcaaccacctacaccttcaaccccaag
ccagccaaccccagcttcctgagccattcgttggttgagctgcttagccagattagccct
gccttcaaaaagaacttcactgtcctgcagaagacaagggtccagcggcatccatttgaa
aggatagccacacccttccaggtgtacagttggaccgccccccaggtggaccacaccatg
gactgtgtcagagctgaggacgcttacacctcccgtctaggctacgaggaacacatacct
ggacagacgcgagactggaatgaggagttgcagacgaccagagagctggcccggaagaac
ctgcctgaacgcctgctgagagagagggccatcttcaaggtccacagtgactttgcggct
gctgctactcggggttccatggcggtgatcgacggcaacgtcatggccatcaaccctggc
gaggagacacgtatgcagatgtttatctggaacaacatcttcttctccctgggcttcgat
gtccgtgaccactaccgcgagctgggcggggacgctgccgcgcacgctgcgcccaccaac
gacctcaacggtgtccgggcttacggggccgtagacgtggaggggctgtacaccctgggg
actgtggtggtggactatcggggttaccgtgtcactgcccagtcgatcatccctggcatt
ctggagagagagcaggagcagagcgttatctacgggtctatcgactttgggaagacagtg
gtgtctcatgggaagtacctggaacttctggagaagaccagtcgaccactcaaggtccag
agacacaatgtgctgaatgagaaggatgagtccgtggagctgtgttcctctgttgagtgt
aagggcataattggcaacgatggacgccactacatcctggaccttctcaggaccttcccc
cccgacctgaacttcctgcctgtggaaggggaggagctttcccctgagagtgtgagacag
ggttttccccgccagcaccgccaccgtctggcctgcctccgacaggagctcattgaggcc
tttgtcgagcacagatacctcctcttcatgaagatggcagcactccagctgatgcagcag
aaagccaacaaggagagcaagatggccaacctgacagagaataacagcccagaggcagcc
gttccagccctgccctccacggagaaccccgatgcttcagccaagtccacagaaaccctc
actgacggcaagtccgacgcagtccagatagagaccacctctacctctgatgcccctcaa
ccagcagcaacagaagccaccaccacagaagcagcccccaaggcagaacaaacaacagaa
acggacattccctctgctgcagcaacaaccgtgactgcctcccaggcaacccctacagag
gataatgtggttcccacggtgaccaccaatgggccattggtgcccgttgccacagcgatt
cagaacggggagtgcgagagccctctggagggtaaggctgaggatagtatcccgggctta
gcccaggccaaagagctggctgagtccttagccgcggaagatggatccggtatcgaccct
aaaagccgagaggttgtcctcaacgcctgcaaggccgtgggttccatcagcaacacctcc
ttcgacatccgcttcaacccagacatcttttctccaggagtgcgtttccctgaggacagt
gtggatgacattcagaaacagaagcagctgttgaaggatgccgcagccttcctggtgtcc
tgtcagatcccctctctggtgaaggactgtctggaccacagtgctctgcctatggatgga
gccacgctgactgaggctctgcaccagaggggcatcaatgtgcgttacctaggcaacgtg
ctggagtttgtggacaagaccccagccaaggcacagctggagcacttctatagaataggt
atcagcgagttgatcaccagatgtgcgaaacatatcttcaagacatacctccagactatg
tactccatctcccagggtgtggagttgtcggccctctcagctgctgtcagccacttcctc
aactgcttcctgtcctccttccctgatgccgtggcacatctgcctgccgacgagctcgtg
tcgcgccgcaagaaccgtaaacgccgtaaccgagtaccagggggaggggacaacacggcg
tgggccagcctgacacccagtgagctgtggaagaacatagtctctgaggcccagagctac
tacaacttcaccctgcactgtgagaatgctgaccaggtagtggagaaatacggccttcag
aagatcaccctgctcagagaaatctccatcaaagctggcatccagatcctgataaaggag
tataactttgacagtcgccacaagcctgccttcacagaggaggacatccttaacatcttc
cctgtggtgaagcacgtcaaccccaaggcctccgatgccttccacttcttccagagtgga
caggccaaggtccagcaaggttaccttaaggagggctgtgagttaatcaatgaggctttg
aacctgttcaacaacgtgtacggggccatgcacgtggagatctgtgcctgcctgcgtctg
ctggctcgccttaactacatcatgggagaccaccatgaggctctcagtaaccaacagaag
gctgtcttgatgagtgagagggtgctgggcgtcgagcaccccaacactatccaggaatat
atgcacttggctctgtactgctttgccaacggtcagctgtccactgccctgaagctgctg
taccgtgcccgctacctcatgctgatggtttgtggggaggaccaccctgagatggcgctg
ctagacagtaacattggcctggtgctgcatggagtaatggagtacgacctgtctctgagg
ttcctggagaacgccttggccatcaactccaaataccacggaccccgctccctcaaagta
gccctcagtcatcatctggttgcgagggtttacgagagcaaggcggagttccgctctgcg
ctccagcacgaaaaggagggctacaccatctacaaaaaccaggtgggagaggcccacgag
aagactaaagagagctcagagtacctgaagtacctcacacagcaggctgtggctttgcag
agaaccatgaacgagatctacaagaacggctccaacgccagcatcatgccactcaagttc
acagcacccagtatggccagtgttctggaacagctcaatattatcaacggcatcatcttt
ataccactcagccaaaaggacttggaaaacctgaaggcggaggttcagcggcggcagcag
cttcaggagtcaggaaaaagcatggaggagctcactgtggacggtccactagagctggag
gacaaaatacccatggacgttaatgttgattaa
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