Oncorhynchus nerka (sockeye salmon): 115136809
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Entry
115136809 CDS
T07952
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115136809
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
EARP complex
115136809
Endosome - Golgi transport
Tethering complex
GARP complex
115136809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Syndetin_C
GrpE
Laminin_II
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
115136809
NCBI-ProteinID:
XP_029528483
LinkDB
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Position
LG11:12154259..12186094
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AA seq
830 aa
AA seq
DB search
MMMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDDVVNKIRLKIRCLDDNIRTVVRGQTNVGQDGRQALEEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKVAQSELGTQILADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTDGPGVKKPETPLESTNPFLEDEIGEDGSEMEEDLDRPKKHKAPDNPFHGII
SKCFESHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIAFTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSET
AKFTLEELCLICSILSTAEYCMATTQQLEEKLKEKVDKNLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKTISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGTDGGPSLSFSTPTPEQENSRIRKLEKLIKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaatttgcggaggatttggaagcgattttgcacctt
actcctgaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcctactgagcagtcactggct
aatatagatgatgtggtcaacaagatccgtctgaagattcggtgtctggatgacaacatc
aggacggtggtgagaggccagaccaatgtgggccaggatggcagacaggcactggaggag
gctcaggtagccatcggccagctctttggtaaaatcaaagacattaaggacaaggctgag
aaatctgagcaaatggtcaaggagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtg
gactctctagaggcaatgacgaggaagaggcagtatggagaggtggctaacctgctacag
ggtgtagtcaacgtcctggagcacttccacaaatacatgggaatccctcaaatcagacag
ctctcagagagggtaaaagtggcccaaagcgagctggggactcagatcctggcagacttt
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaatgttctgagg
gatgcctgtcttgtggccaacgtcttggacccccgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaaccaggatgtagct
tggctggataagattgaccggcgctacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgttccctgaagagtggtgtatgactgaacgcatcgctgtggag
ttctgccacatcaccaggacagagctggccaaagtgatgcggacgcgggccaaagagatc
gaggtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccgacgggcccggggtgaagaagccggagacacca
ctggagtccaccaaccctttcctggaggacgagattggagaggatgggtcagagatggag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcattatt
tccaagtgcttcgagtctcacctctatgtctacatcgagtctcaggacaagaacctgggg
gagatgattgaccgttttgtgtcagacttccgggcgcagggcccccccaaggcgggcacg
gaggacggtggagcggtgctgcccagctgtgctgacctgtttgtctactataagaagtgc
atggtgcagtgctctcagctcagcacaggggaacctatgatcgccttcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagc
agtaacagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggagact
gctaagttcactctagaggagctgtgcctcatctgtagcattctcagtactgcagagtac
tgtatggccacaacacagcagttggaggagaagctgaaggagaaggtggataagaacctg
gtagagagaatcaacctgactggagagatggacacattcagcaatgtgatctccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgaccctgctctcactgccatgagc
aagatgccatggcagagcgtagagcatgtaggtgaccagagtccctatgtgacgtcagtc
atcatgcacatcaaacagaacgtccccatcatcagagataacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactctttcattcctaaattcatcaaccac
ttgttcaggtgtaagactatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctataggctctcaggtggtccgcaaggcc
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctctgtggtgtttgtggataactacatcaagctcctt
gctgacgggaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggagctcttcagacagaggttacccactccaccctcggggacc
gatggaggcccctctctctccttcagcacccccacccccgagcaggagaactcacgcata
cgcaaactggagaagctcatcaagagactctga
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