Oncorhynchus nerka (sockeye salmon): 115136818
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Entry
115136818 CDS
T07952
Name
(RefSeq) RILP-like protein 1 isoform X1
KO
K13883
Rab-interacting lysosomal protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115136818
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115136818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115136818
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115136818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH1
RILP
ATG16
Motif
Other DBs
NCBI-GeneID:
115136818
NCBI-ProteinID:
XP_029528495
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Position
LG11:complement(12437759..12454239)
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AA seq
433 aa
AA seq
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MEKDCGRNDQKQDVKKTEVCFERTCSALTVDDVYEIAKLIGSEVETLIDGYGKESATGLV
PKIVKVLELLESFASRNHSHKSKEEELLKAFETLNVQKQKKTRNVKECEESKSEIQRQEV
QEEVEKQRRRCEELQAQVLHLQMENQELQSCLRGNHVQEDRVQRQEREVMLKLKEVVDKQ
RDELRAKVQQIGSVSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVERKADMEADL
REKQKEIERLTTQLEKANTAAGTANPCKTEVDLTDKLVIDLKDPNRPCFTKQEVREMLTE
RNELKANLFLVQEELSYYQREILNDERCPGFLLDAVRSAIKKQKTVIKAKMLGMPEDECS
SDEEKGPLFERRAETETGTDSTDSKPQESRIRNLFGFLTRSGSNLSSRSPSENNAASSWE
IIDDTDNTAETEP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggattgcggtagaaacgatcaaaagcaagacgtcaagaagacagaggtgtgt
tttgaaaggacatgttcagcactaactgtggacgatgtatacgaaatagctaaattgatt
ggctcggaagtggaaacacttattgacggctacggtaaagagagcgccacaggactggtg
cctaaaattgtcaaagttctagaacttttggagagcttcgcatcgcggaaccattctcac
aagtcaaaagaagaagaattacttaaagcgttcgaaacacttaatgtacagaaacagaag
aagacgagaaatgtgaaagaatgcgaagaaagcaagagcgaaatacaacggcaggaggtg
caggaggaggtggagaagcagaggaggaggtgcgaggagctgcaggcccaggtattgcat
ctacagatggagaatcaggagttacagagctgcttgaggggcaaccatgtccaggaagac
cgtgtccaacggcaagagcgggaggtgatgctgaaactgaaggaggtggttgacaagcag
agagatgagttgagggccaaagtacagcagataggaagcgtgtctaaggaggtggaggcg
ctgcaggagcagttggagcgcttcatgaagatgaatggggagctgagacacaagcagagc
atcgtcacggcccaggtgaagaatgctgtggagaggaaggctgacatggaggcagacctc
cgagagaaacagaaagagatagaacgcctcaccacccagctggaaaaagccaacactgct
gctggcacggccaatccgtgtaagaccgaagtggacctgactgacaagctggtgatagac
ctgaaggatcccaacagaccctgtttcaccaagcaggaggtcagagagatgctgacagag
aggaacgagctcaaagccaacctgttcctggtgcaggaggaactctcctactaccagagg
gagatcctgaatgatgagcggtgtccaggcttcttgctggatgctgtacgttctgccata
aagaaacagaaaactgtcatcaaggccaagatgttgggcatgccagaggacgaatgcagc
agtgatgaggagaaaggacccctgtttgagaggagagcagagacagaaaccgggacagac
agcactgacagcaaaccacaagagtctcgcatcaggaacctctttggcttcctgacccgc
tccggcagcaacctcagcagccgtagtcccagtgaaaacaatgctgcttcttcctgggaa
atcatcgacgacactgacaacactgcagagacagaaccctga
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