Oncorhynchus nerka (sockeye salmon): 115136850
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Entry
115136850 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: stAR-related lipid transfer protein 13-like
KO
K20632
deleted in liver cancer protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115136850
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115136850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
115136850
NCBI-ProteinID:
XP_029528552
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Position
LG11:14316318..14351547
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AA seq
1171 aa
AA seq
DB search
MYRDLSDRDSEPQGPGSESLGSSMSQDSQDCLGSMTQESQDIYLRMDHHRRRSGYRLGRI
IARQQLLRRIAGELEAKEACDWLRAAGFPQYAQLFEDSQFPIDISPVKKDHDFLDNDLVE
PLCRRLNTLNKCASMKLDVNLPKKKSEDSDEEDLFAISDRWTFECTSRRWSRLKGEGHSP
REGEGQGLQTTTSSESVLTDLSEPEVSSLHSESSGGSGHQAVSTEDSDSSNRNYYSAAMP
EPDSTSLTLPHLPKHLPYYGSLPAKNGRAGRTRAKDFLHRMETLRSRDTLGRGHCKKLVI
SAPVLQTEPQALKTLRCVEITNGDRSGAEVTTGGPILGLTPQCPSSSEGSHSSGSTVSSP
SLQERKPHSQRTDRSDAKRSGMYLEDLAMFSSLQRIGGVAQGKRGVAEHNQRNEFRSYEN
LVVHIPKDHKPGTFPKALSIESLSPILGASVPCHREPGDSLEPQSNPQPTYNPREFYHRP
LTQFCPRGSRISVYDNVPGSHLYASTGDLLDLEKEDLFPHLDDILQHVNGLQQIVDRWSK
NILPSAGLDGQGIQPAGLKSSSQITLDFEGTSVLEGQSTSSDGDRDGVSLIETHCTGHRE
RRDSGVGASLTRPNRFQMSNRLSHSVASLQITNQSAGQLSLLQKFSLLRLTAIMEKYSMS
NKHGWTWSVPKFMKRMKVPDYKDKNVFGVPLIVHVQRSGXPLPLSLQQALRYLRSQCLDQ
VGLFRKSGVKSRIQALRQMNESSPDDVSYEDQSAYDVADMVKQFFRDLPEPLLTSKLGET
FLHIYQVRTDTHTHTRAPYVPKDQRLQAVQTAIMLMSDENREVLQMLLCFLSDVTSSVEE
NQMTPMNIAVCLAPSLFHLNILKKDNLSPRAMQRKYTTGRPDQKDLNENLAATQGLAHMI
IECNRLFEIPHEMVTQSRNSYVEADLHAPTLEELCRQQEEDDASYQTEARPCQTHSETRP
QNLYQSYVESRLQELLKEAREKAKGWVSCTSSDNTELYCKKVGDGNPLRQWRVAVEVEAP
PSVLLNRVLRERHLWDVDLLQWKVAETLDRHTEVFHYVLNRMPPHPSRDFLVLRSWRTDL
PKGTCALVCVSVEHEDCPRVGGVRAVVLESNYLLEPCGSGKSRLTHICRVDLKGRSPEWY
NKAFGHLCAAEAARIRNSFQPISTEGPETKI
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtacagggatctgtctgacagagactctgagccccaggggccaggcagtgagtctctg
ggtagcagtatgagtcaggacagccaggactgtctgggcagtatgacccaagagagccag
gatatctacctaaggatggaccaccaccgccgtcgctccggataccgcctgggacgcatc
attgcccggcaacagctactccggaggatagctggagaactcgaggcaaaggaggcgtgt
gattggctacgagcggcaggattcccccaatacgctcagctctttgaagactctcagttc
cccatcgacatctctcctgtgaagaaagaccatgactttctggacaacgacctggtggaa
cctctctgcaggcgactcaacaccttgaacaagtgtgcctctatgaaactagacgtcaac
ctccctaagaaaaagagtgaagactctgatgaggaggacctgtttgccatcagtgacaga
tggacgtttgagtgtacgagccgccgctggtccagactaaagggggaggggcatagtccc
agggagggggaggggcagggtctgcagaccaccaccagtagcgagagtgttctaactgac
ctcagcgaaccagaggtctcatctctccacagtgagagcagtggggggagtggccaccag
gctgtgagcacagaggactccgacagctctaaccggaactactactctgcagcgatgcct
gaacctgactccacctcccttaccctaccacacctccctaagcacctcccctactacggc
tcgctgcccgccaaaaacggccgcgctggacggacccgagccaaggacttcctgcaccgc
atggagaccctacgttcccgggacacgctgggtagggggcattgcaagaagctggtgatc
agcgctccggtactgcagacagagccacaggccctgaagacgctgcgctgcgtggagatc
accaatggggacaggtcgggggcggaggtaaccactgggggacctatcctagggctaacc
ccccagtgcccctccagcagcgagggcagccactccagcggcagcactgtctcatccccc
agtctgcaggagaggaagccccactcccagcggacggaccggtccgacgccaagcgcagt
ggcatgtatctggaggacttggccatgttctccagcctgcagcggatcggtggcgtggcc
caggggaagaggggcgtggccgaacacaatcagcgtaacgagttccgctcctacgagaac
ctggtggtccacatccccaaagaccacaagcctggcaccttccccaaggccctgtccata
gagagcctctcccccatcctgggggcctctgtcccctgccacagagagcctggagacagc
ctggagccccagtccaacccccaacctacctataacccgagggagttctaccatcgtccg
ctcacccagttctgcccacggggcagtaggatcagtgtgtacgacaatgtccctgggtct
cacctctatgcctctactggagacctgttggacctggagaaggaagacctgttcccccac
ctggatgacatcctgcagcacgtcaacggcctgcagcagatagtggaccgctggtccaag
aacattctgccctctgcaggcctggacggacaggggatccagcctgcaggtctgaagtca
tccagccagatcacgctggactttgaggggacgtctgttctggagggacagagcacatcc
agtgacggggacagagacggcgtgtccctcattgagactcactgtacaggacatagagag
aggagggactcaggggtgggagcatcactaaccagacccaaccgcttccagatgtccaac
cggctcagccactcagtggcctcgctccagatcaccaaccaatcagcaggccagctcagc
ctgctgcagaagttctctctcctccgcctcactgccatcatggagaaatactccatgtcc
aacaaacacggatggacctggtcagttccaaagttcatgaagaggatgaaggttcctgac
tacaaggacaagaatgtgtttggtgttcctctgatcgttcacgtccagcgctctggtncg
cccctccccctcagcctgcagcaggccctccgatacctcaggagccagtgtctagaccag
gtgggtctgttccgtaagtctggtgtgaagtctcgtatccaggcgctgagacagatgaat
gagtcgtctcctgatgatgtcagctacgaggaccagtcggcgtatgacgtagcagacatg
gtcaaacagttcttcagagacctgcctgaacctctactgaccagcaagctgggagagacc
ttcctacacatctaccaggtaaggactgatacacacacacacacgcgcgcgccatatgtt
cctaaggaccagcggttgcaggctgtgcagacggccatcatgctgatgtcagacgagaac
agggaggtgctccagatgctgctctgcttcctgtctgatgttacttcctctgtggaggag
aaccagatgactcccatgaacatcgctgtgtgtctggccccgtccctgttccacctcaac
atcctgaagaaggacaacctctcacccagggccatgcagaggaagtacacaacaggccgg
cccgaccagaaggacctgaatgagaaccttgccgcgacgcagggactcgcccacatgatc
atagagtgcaaccgactgtttgagattcctcacgagatggtgactcagtccaggaactcg
tacgtggaggcggaccttcacgctcccaccttagaggagctctgtagacagcaggaggag
gacgatgcgtcctaccagacagaggccagaccctgccagacacactccgagaccagaccg
cagaacctgtaccagagctacgtagagagcaggctgcaggagctcctgaaggaggccaga
gagaaggctaagggctgggtgtcctgcaccagctcagacaacactgagctctactgtaag
aaggtgggtgatgggaaccctttgcggcagtggcgtgtggcggtggaagtggaggcccct
ccctcggttttgttgaaccgcgtgctgcgagagcgccacctgtgggatgtggacctgcta
cagtggaaggtagctgagactctggacagacacactgaggtgttccactatgtcctcaac
cgcatgcccccacaccccagcagagacttcctggtcctacggtcgtggaggactgacctt
cccaaggggacatgcgcattggtctgtgtgtctgtagaacatgaggactgtccccgggtc
ggtggggtgagggccgtggttctagagtccaactaccttctagaaccctgcggctctggg
aagtccagactcactcacatctgcagggtggacctcaaggggaggagtccagagtggtac
aacaaggcctttggtcacctctgtgctgctgaagctgctcgtattcgcaactccttccaa
ccaatcagcacagaggggccagagaccaagatctga
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