Oncorhynchus nerka (sockeye salmon): 115136851
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Entry
115136851 CDS
T07952
Name
(RefSeq) spartin-like isoform X1
KO
K19366
spartin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115136851
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Gene cluster
GFIT
Motif
Pfam:
Senescence
MIT
Motif
Other DBs
NCBI-GeneID:
115136851
NCBI-ProteinID:
XP_029528553
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Position
LG11:complement(14420972..14437975)
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AA seq
644 aa
AA seq
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MTQNLPLLEKLEILFRLLKRQTSDVDHIHLTGACRLTLTGMEEASQDAFDRARLQVIKDG
YEKAFECINRGLTEDEAGHKAQALAQYTQGRQHLLRAISVPSQGHECVGCSWESARQMQH
KMQETLNNITTRLAVLETSPDPEFPPPLDASNGVPGTASNSNLYPKLEKEKPERPSPPKL
LMTNRQGGDVGGSVFPSLPLSPTRQSVVPGELPPAYSSQAADGHLTISYGTESGEMSLVG
EEFYSHMSPSPPSPHSLGEDGEELFFLPHGVQIFFVTPDGQVSAPSYPGYLRMVKFTSQQ
SERVPNRPPAFLQVCDWLYPLMATDSPVLLCNTGVFMFPDMMASAPGSYVGVVLSSELPI
EDRQLFQDLLSQMTDLRVQAPNEAADSINLSQKVSIASLEEEEAPAAGEEEEKNLPEWSE
KVASGILTGASWLSWGLVKGAEFTGIAIQKGASKLREHITPEDKPAHVSPSVSKGLHVAK
QATGGAVRVSQFLVDGVCMVAGCVGRELAPHVKKHGGKLVPESMKKDKDGRSNIDGAMVV
AASGVQGFATMWTGLEVAAKNITVSVASETVNTVKHKYGAAAGQATDHAVNSAINMGVTA
FNIDNLGIKAAVKKTGKQTAVAILEDYQLRDPNTNQKQVEKRDK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaccttcccttgctagaaaagcttgaaatcttgttcagactgctaaaaaga
cagacgtcagacgttgatcacattcacttgacaggagcttgtcgtctaacgttaacgggc
atggaggaagccagtcaagatgcctttgacagagccaggctgcaggtgatcaaagacggc
tatgagaaggcctttgagtgcatcaacaggggcctgaccgaggatgaagctggccacaag
gcccaggccctggcccagtacacacagggacgccagcacctcctcagggccatcagtgtg
ccctcacaggggcatgagtgtgtggggtgctcctgggagtcagcccgccagatgcagcac
aagatgcaggagactctgaacaacatcaccactcgattggcggtcctagagaccagccca
gaccctgagttcccaccacctctagatgcctctaatggagtcccagggacagcctctaac
tcaaacctctaccccaaactggagaaggagaaaccagagcggccgtctccacccaagctg
ctgatgactaaccgccaaggtggagatgtgggaggcagtgtgtttccctccttgcctctt
tctcccactagacagtctgtggtgcctggcgagctgcccccagcctactcttcccaggcg
gctgacggccacctgactatctcctacgggacagagtctggagaaatgtcgctggtggga
gaggagttctacagccacatgtccccctctcccccctctcctcatagcctgggggaggat
ggagaggaactcttcttcctgcctcacggggtacagatattctttgtcacacctgacggc
caggtcagcgctccctcctacccagggtacctgcggatggtcaagttcaccagccagcag
tcagagagagtgcccaaccggcccccagccttcctgcaggtgtgtgattggctgtacccg
ctgatggccactgactcccccgtcctgctgtgtaacacaggggtgttcatgttccccgac
atgatggcgtccgccccggggtcctacgtgggcgttgtgctgtcctctgaactgcctata
gaagacagacagctgttccaggacctgctgtcccagatgacagacctccgggtgcaggct
ccaaatgaggcagcagacagcatcaacctgagccagaaggtgtccatcgcttccctcgag
gaagaggaggccccagcagcaggagaggaggaggagaagaatctgccagagtggagcgag
aaagtggccagcggcatcctcacaggggcatcgtggctgagctggggcctggtgaagggg
gctgagttcactggcatagccatccagaagggggcgtccaaactgcgtgagcacatcacc
ccagaggacaagccagcccatgtcagcccctctgtctccaagggattgcatgtagccaaa
caggccaccgggggcgctgtccgcgtcagccagttccttgtggacggtgtgtgtatggtg
gcagggtgtgtgggtagagagctagctccccacgtgaagaaacatggaggcaagttggtc
ccggagtccatgaagaaagacaaagatggacgatccaacattgatggagccatggtggtg
gctgctagcggagttcaaggcttcgctaccatgtggactggcttggaagtagcagcaaag
aacatcaccgtctctgttgcctccgaaaccgtcaacactgtcaagcataagtatggggct
gcagccggccaggccacagaccatgctgtgaactcagccattaacatgggcgtcaccgcc
ttcaacattgacaacctgggcattaaagctgcggtgaagaagactggcaaacagacggct
gtggccatcctggaggactaccagctacgggatcctaatactaaccagaaacaagtagag
aaacgggacaaatag
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