Oncorhynchus nerka (sockeye salmon): 115136857
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Entry
115136857 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: 60S ribosomal export protein NMD3-like
KO
K07562
60S ribosomal export protein NMD3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03008
Ribosome biogenesis in eukaryotes
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115136857
03008 Ribosome biogenesis in eukaryotes
115136857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115136857
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115136857
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMD3
NMD3_OB
NMD_SH3
Motif
Other DBs
NCBI-GeneID:
115136857
NCBI-ProteinID:
XP_029528567
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All DBs
Position
LG11:complement(14768578..14779812)
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AA seq
504 aa
AA seq
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MEYMQAPATSSQGNILCCTCGIPIPPNPANMCVSCLRTTVDISEGIPKQVNLHFCKQCER
YLQPPASWVQCALESRELLALCLKKLKGNMTKVRLIDAGFLWTEPHSKRIKLKVTIQKEV
MNGAILQQVFVVEFVIQGQMCDDCHRVEAKDFWNSVVQVRQKTSHKKTFYYLEQLILKHK
LHQNALNIKEIHEGIDFYYATKQHAQKMVDFLQCTVPCRSKTSQRLISHDIHSNTFNYKS
TYSIEIVPVCKDNVVCLSPRLAQSLGNMGQVCVCARVTSTIHLIDPNTLQIAEVDGGTYW
RNPFNSLVSPRQLEEFIVMDTDVIRNQKLRAGAGIRSNKHTLAEVWVQKTSEMDTAQQYH
CRTHLGHLLNIGDLVQGFDFANSNVNDEFLNKMNPSHIPDVVLIKKSYNRSKRVKRRNWK
LKEMDKDREGMAPEDERQYQDFLEDLEEDEALRKNVNIFRDASKIPVESDTDDEGAPRIS
LMEMLEDLSLSDATGGEGADMLTE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagtacatgcaagctcctgccacgagcagtcaggggaacatcctgtgctgcacctgt
ggcatccccatccctccaaacccagccaacatgtgtgtgtcttgcctcaggaccacagtg
gacatctctgagggaatccccaagcaagtcaacctgcacttctgcaagcagtgtgaacgg
tacttgcagcctccagcctcctgggtgcagtgtgctctggagtccagggaactgctcgcc
ctctgccttaaaaaactgaagggcaacatgaccaaagtgcgtctgatcgatgctggattc
ctgtggacggaaccccactccaagcggatcaagttgaaggtgaccatacagaaagaggtg
atgaacggagccatcctgcagcaggtgtttgtggtggagtttgtcatccagggccagatg
tgtgacgactgccaccgtgtcgaggccaaggacttctggaactctgtggtgcaagtcaga
cagaagacttctcacaagaagaccttctactacctggagcagctgattctcaagcacaaa
ctccatcagaacgcactcaacatcaaggagatccatgagggtattgatttctactatgcc
accaagcagcatgctcagaagatggtggatttcctccagtgcacagtcccctgcaggtcg
aagacttcccagcgcctcatctcccatgacatccactcaaacacgttcaactacaagagc
acctactccattgagatcgttcctgtttgcaaggacaacgtggtgtgtctgtcgccgcgt
ctggctcagagcctggggaacatgggccaggtgtgtgtgtgcgcccgagtcaccagcacc
atccacctgatcgaccccaacaccctgcagattgctgaggtggatgggggcacatactgg
cgcaaccccttcaacagcctcgttagcccacggcaactggaggagttcatcgtcatggat
actgacgtcatcaggaaccagaagctgagggcgggagcaggcataaggtccaataagcac
actctggctgaggtgtgggtgcagaagacctcagagatggacacggctcagcagtaccac
tgtcgcacccatctgggccacctgctcaacataggagacctggtgcagggctttgacttt
gccaattccaacgttaatgacgagtttctgaacaagatgaaccctagtcatattcctgac
gtggtgctgattaagaagagctacaaccgcagcaagagggtgaagcgcaggaactggaag
ctgaaggagatggacaaagacagagagggcatggcgcctgaagacgagagacaataccag
gacttcctagaggacctggaggaagacgaagccctgagaaagaacgtcaacatcttcaga
gatgcgtctaagatcccagtggagagtgacacggatgacgagggtgctcctcggatctct
ctgatggagatgctggaggacctcagcctatcagacgccaccggaggagagggagccgac
atgctgaccgaatag
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