Oncorhynchus nerka (sockeye salmon): 115136861
Help
Entry
115136861 CDS
T07952
Name
(RefSeq) structural maintenance of chromosomes protein 4-like isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115136861
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
115136861
Condensin II
115136861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
CCDC113_CCDC96_CC
THOC7
TPR_MLP1_2
HIP1_clath_bdg
ABC_tran
Motif
Other DBs
NCBI-GeneID:
115136861
NCBI-ProteinID:
XP_029528571
LinkDB
All DBs
Position
LG11:complement(14861891..14883062)
Genome browser
AA seq
1299 aa
AA seq
DB search
MPAKTSKSSTASKSRGKGSQPRDDSEDELDVPLKEANSNGQEAPPKAPPTNYPAPREGAD
AVDNRSLEEILGSIPPPPPPAMTNEPGSPRLMITHIVNQNFKSYAGEQILGPFHKRFSCI
IGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDLHKDVQSCTVEVHFQKIIDKE
GDDYEVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGE
VEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTLSRRVELLNEQRGEKLNRVKMV
EKEKTALEGEKNTAVEFLTLENDIFKQKSQLCQYYVHDLQKRVANKEEEKQRIQDDTKEL
TEKNNNIAEEMEKKNRDLKNVEKKQGKLTKYIEGQKEKFTQLDLQDVEVREKLKHTKSKT
KKLQKQLEKDKEKLEEVRNVPASSEKTISEASARREELEKQKGKEEENLKEVMASLKEET
SGLQQEKETKEKELMELSKAVNETRSCQDVAQSELDIYLSRHNTAVTQLNTAKQSLQTTT
DTLRDRRSAIKELQVNIPQCEQELKKDEAELEQLLQADGQARELVRDLRQKVEEAKSSLS
SNRSRGKVLDALMQQKRSGKISGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTA
QKCVNFLKAQNIGVATFIGLDKMKVWENKMGPISTPENIPRLFDMVRVQDESMKPAFYFA
LRDTLVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGTMTGGGGRVMRGRMGSSIGTEV
TQQELDRMESKLNEKVVQLQGCQERKLQLEEKVQRLRQQLRDMKNTLEKYTNSMQSLAEQ
EAHLKPQIKELEANVQAAAPDKKQQKQLEKSLKDFQKDFEAASSKAGKVEAEVKRLHTLI
VDINSHKLKAQQDILDKVNKELDDCSSAVTKAQVAIKTAGRNLKKCEEGVSRLEGELVEN
EKSLVDLTEHLTRLEEEAGEIMKACQEAEAALPEVQEQHQGVVREIKVLQAQEHALQEES
LGVRLRVEQIDTSITEHTNKIKHWQREASKLSLHAIEDKPAEALPALTPADLAAIKGPDV
ITNQISLMEARCAQMKPNLGAIAEYKKKEELYLKRVAELDEITTERDNFKRGCEDLRKQR
LNEFMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNL
SGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISL
RNNMFEIADRLIGIYKTHNTTKSVGINPKTIVFKEPISV
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaaacgtcgaaaagttcaactgcttccaagtctagagggaaagggtcgcag
cctcgggatgactccgaagacgagttggacgtaccccttaaagaagcgaactccaatggc
caagaggcaccgccgaaggcaccgccgacaaattatccggctcccagggagggtgccgat
gctgttgataatcgaagtttggaggagattcttggtagcatccctccacccccgccccca
gcaatgaccaatgaaccaggctctcctcgcttgatgataacacatatagttaatcagaac
ttcaaatcctacgctggcgagcagattctgggccctttccataagcgcttttcctgtatc
attggtccaaatggcagtgggaagtccaacgtgatagattcaatgctctttgtgttcggc
tatagggctcaaaaaatcagatccaaaaaactctctgtgctgattcacagctctgaccta
cacaaggatgtgcagagctgcactgtggaagtgcattttcagaaaattattgacaaggaa
ggagatgactacgaagtcatccccaacagcaagttctatgtttccagaactgccagcaaa
gacaattcctcgtcctaccacatcaatggcaagaaggccacttttaaagatgtgggaacg
ctgctgcgtagccatggcattgacctggaccacaacagatttctgattttacagggtgag
gtggagcagatagccatgatgaagcccaaggggcagacggagcatgacgagggcatgctg
gaataccttgaggacattattggctcctgccgtctgaagcagcccatccacaccctgagc
cgccgcgtggagctcctcaacgagcagaggggagagaagctaaacagggtcaaaatggtg
gagaaggagaagactgctctggagggagagaagaacacagccgtggagttcctcactctg
gagaatgatattttcaaacaaaagagccagctctgccagtactatgtccatgacctccag
aagagagtggcaaacaaagaggaggagaagcagaggatccaagatgacaccaaggaactc
acagagaaaaacaacaacatcgctgaggaaatggagaagaagaaccgagacctgaaaaac
gtggagaagaaacaaggcaagctgaccaagtacattgagggccagaaggagaagtttacc
cagctggacctgcaggatgtggaggtccgagagaaactgaagcacaccaagagtaagacc
aagaaactacagaaacaactggagaaggacaaggagaagctggaggaggtgcgtaacgtg
ccggccagcagtgagaagaccatctctgaggcgtctgcgcgcagggaggagttggagaaa
cagaaggggaaggaggaggagaatctgaaggaagtgatggcgagtctgaaggaggagacc
agcggcctgcagcaggagaaggagactaaagaaaaggagctgatggagctgagtaaggct
gtgaacgagacacgctcctgtcaggacgtggcccagtctgagctggacatctacctgagt
cgccacaacaccgctgtgacccagctaaatacggccaagcagtcccttcagaccaccacc
gacacgttgcgagaccgccgctccgccatcaaagagctgcaggtcaacataccccagtgt
gagcaggagctcaagaaggatgaggcggagctggagcagctgctgcaagcagacggacag
gccagggagctggtgagggacttgaggcagaaggtggaggaggccaagagctccctgtcc
tctaaccgcagccgggggaaggtgctggacgccctcatgcagcagaagaggagcggcaag
atctccggtatcctgggacgactaggtgaccttggggccatcgatgagaagtatgacatc
gccatctcatccagctgtggctctctggacaacatcctggtggacagcatcgacacggcc
cagaaatgtgtcaacttcctcaaggcccagaatatcggtgtggccacctttatcggcctg
gacaagatgaaggtgtgggagaataagatggggcccatctccaccccagagaacatcccc
cgtctgtttgacatggtgcgggtgcaggatgagagtatgaagccagccttctactttgcc
ctgagggacaccctggtggccaaggacctggagcaggcaacacggcttgccttccagaaa
gacaagcgctggagggtggtcaccatgcagggacagatcatagagatggctggcaccatg
actggaggtggagggagagtgatgcggggcaggatgggctcctccatcggcactgaggtc
acccagcaggagctggaccgtatggagagcaagctgaatgagaaggtggtgcagctgcag
ggctgccaggagaggaagctgcagctggaggagaaagtccagcgactcagacagcagctc
agagacatgaagaacaccctggagaaatacaccaacagcatgcagagcttggcagagcag
gaggctcacctgaagcctcagattaaagagctggaggccaatgtccaggcagctgcccct
gacaagaaacaacagaaacagttggagaagagcctgaaggatttccagaaagactttgag
gcagcctcaagtaaggcagggaaggtggaggctgaggtgaagaggctccacaccctcatt
gtggacatcaacagccacaagcttaaggcccagcaggacatactggacaaggtcaacaag
gagctggacgattgctcctcagccgtcaccaaggcccaggtggccatcaagaccgcaggg
cgtaacctgaagaagtgtgaagagggtgtaagtcgcctggagggggagctggtggaaaat
gagaagagcctggtagacctgacggagcatctgacgaggctggaggaggaggctggggag
atcatgaaagcctgccaggaggctgaggcggcactgccggaggtgcaggagcagcaccaa
ggggtggtgagggagatcaaggtcctgcaggcgcaagagcacgctctgcaggaggagtcc
ctcggcgtccgcctccgagtggagcagatagacacctccatcaccgaacacaccaacaag
atcaaacactggcagagagaggcctctaagctttcccttcatgccattgaggacaaacca
gcggaggcgctgcccgcgctgacccctgctgacctggcggccatcaaggggcctgacgtc
atcaccaaccagatctccctaatggaggcccgctgtgcccagatgaagcccaacctggga
gccatcgcagagtacaagaagaaggaggaactgtacctgaagcgtgtggctgagttggat
gagatcaccacagagagagacaacttcaagcgtggctgtgaggacctgcgcaagcagaga
ctcaacgagttcatggctggcttcaacatcatcaccaacaagctgaaggagaactaccag
atgctgacgctagggggtgacgctgagctggagctagtcgacagcctggaccccttctct
gagggcatcatgttcagtgtgcgtccccctaagaagagctggaagaagatttttaacctg
tctggaggagagaagaccctgagctctctggccctggtgtttgctctgcaccacttcaag
cccacgcccctctacttcatggatgagattgatgcagccctggacttcaagaacgtctcc
atcgtggcctgttacatttatgagcaaaccaagaacgctcagttcatcatcatctccctg
aggaacaacatgtttgagattgctgaccgtctgattggcatctacaaaacccacaacacc
actaaaagcgtgggaatcaaccctaaaaccattgtcttcaaagagccaatctcagtttag
DBGET
integrated database retrieval system
