Oncorhynchus nerka (sockeye salmon): 115136863
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Entry
115136863 CDS
T07952
Name
(RefSeq) tripartite motif-containing protein 59-like
KO
K12028
tripartite motif-containing protein 59
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115136863
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115136863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_10
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
115136863
NCBI-ProteinID:
XP_029528574
LinkDB
All DBs
Position
LG11:14855781..14859789
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AA seq
452 aa
AA seq
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MTRAATSQVHRASLSHHPTMDNLEEDLTCSVCYSLFADPRVLPCSHTFCKSCLDNVLQVS
AVYSIWRPLRLPLKCPNCRSVVELPPTGVDALPINVSLRAIIEKFQKDSQPQPPSCPEHH
RQPLNIYCVQDRQLICGFCLTVGQHQGHPIDDLQAAFIRERQAPAHLLGRLSDHRWAEVC
ELGEQLEQEKASCEGLVRQDRQAVEQYFQGLELVLSRKKEAFMGALDTASMEVSLAYNPL
IQRLKELQEEQLDLLSLGSAVEDEDSPLVFLEKVYLFRERVEALVNATLPEVTSLTITPR
AAEYLEQHWVGVTIGVLEEGPVPRVCCCAKSTILEMVLRTETRSQPGGWVHDLWQQLHPT
PPVVLLGMGMLLLLAAVWVNPVGGASLGFSLLSQLSQMVHGLSSELTTSLWETTGFLYAQ
TGEVVWRYSSALSTLGENTYQQLASLYKTLSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggcagcaaccagccaggtacacagagcctcattgtcccatcaccccaccatg
gataacctagaagaggacctgacatgttctgtgtgctattccctctttgctgatcctcgg
gtcctgccctgctcccacaccttctgtaagtcctgcttggacaacgtactccaagtctct
gccgtctattcaatctggcgtccgctgcggctcccactcaagtgccccaactgccgcagt
gtggtagagctcccgccaacaggtgttgatgcgttgcccataaatgtctccctccgcgcc
atcattgagaagttccagaaggacagccaaccacagcccccctcctgccctgagcaccac
cgacagcccctcaacatctactgtgtccaggaccgccagctcatctgtggcttctgccta
acagtgggccagcaccagggacaccccatcgatgacctgcaggcagccttcatcagggaa
aggcaggcacccgctcacctactggggaggctctcagaccaccgctgggcagaggtgtgt
gagctgggggagcagttggagcaagagaaggccagctgcgagggcctagtgaggcaggac
cggcaggccgtggaacagtacttccaggggctggagctggtgctttccaggaagaaagag
gcattcatgggggccctggacaccgcaagcatggaggtgtcactggcctacaatccactc
atccagaggctgaaggagctgcaggaggagcagctggacttgttgtctctgggctcagct
gtggaggatgaagactcccccctggtgttcctggagaaggtgtatctgttccgggagagg
gtggaggcactggtaaatgccaccctgcccgaagtcacatccctcactatcaccccccgt
gctgctgagtacctggagcagcactgggtgggggtgaccatcggagtgctggaggaaggg
ccggtgcctcgggtctgctgctgtgccaagtccaccattctggagatggttcttaggaca
gagacaaggagtcaacctggaggctgggtccatgatctgtggcagcagctccatcccact
cccccagtggtgctcctggggatggggatgctgctgctcctggcggcagtgtgggtgaat
cctgttggcggagcatctctgggattctccttgctgtcccagctcagtcagatggtgcac
ggcctgagtagcgaactgaccacctcactatgggagacaacaggctttctgtatgcacag
acaggggaggtggtgtggaggtacagctctgccctctccacactgggggagaacacctac
cagcagctggcatccctctacaagaccctcagctcctga
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