Oncorhynchus nerka (sockeye salmon): 115136896
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Entry
115136896 CDS
T07952
Name
(RefSeq) bactericidal permeability-increasing protein-like
KO
K25374
bactericidal permeability-increasing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
115136896
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Motif
Other DBs
NCBI-GeneID:
115136896
NCBI-ProteinID:
XP_029528647
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Position
LG2:complement(26147992..26155060)
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AA seq
510 aa
AA seq
DB search
MCLSSPFILPCRQPGCNNNRSSTPLSYSCIRQVTVVKMSPCCWLALLALVPLALATNPGV
KVKLTEKGIEYGKQIGMASLQQKLKTMKVPDLSGTERVAPIGKVKYSLTGITIVNLGLPY
SALALVPDTGISLSITNAFISLHGNWKIRYLSFIKDSGSFDLEVNGLTVTDSITIKSDET
GRPTVSSVNCVANVGSASIKFHGGASWLYNLFSAYIDKALRSALQKQICPLVADTITDMN
PHLKTINVLAKVDKYAEVEYSMVTSPTISNTSIDFSLKGEFYNIGKHQEPPFSPTPFSLP
PQVNNMLYIGMSAFTTNSAGFVYNNAGALSLYITDDMIPPSSPIRLNTRTFGAFIPEIAK
RFPSMMMKLLVKTVKEPTIFFEPNNVTVQASGSVTAYAIQPNTTLSPLFVLNMEGSVSAR
LYVTGVKLAGAVTLNKIEMTLETSYVGQFQVRSLDNIFLMVLKVAVIPKVNARLEKGFPL
PSIGKMNLVNTQLQVLKDYMLIGTDVQFTG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctctcttcccctttcattctgccctgccgccagccagggtgcaacaacaacaga
agttctacaccactttcttactcgtgcataagacaggtgactgtagtcaagatgtctcca
tgctgttggctggctctgttggctctcgtccccttagctctggccaccaaccctggagtc
aaggtcaaactcacagagaagggcattgaatatggcaaacaaattgggatggcatctctg
cagcagaaactcaagaccatgaaggtcccagacctctctgggacagagcgagttgctccc
attggcaaggtcaagtacagtttgacaggaataacgatagtgaatctgggactgccgtac
tctgctctggcactggtgccagatactggaatcagcctaagcattactaatgccttcatc
agcctgcatgggaattggaagatccgatacctcagtttcataaaagacagtggctccttc
gacctggaggtgaatggactcaccgtcactgacagtattacaatcaagagtgatgagact
ggcaggccaacggtcagcagtgtcaactgtgtggccaacgtgggcagtgccagcatcaag
ttccatggtggagcaagctggctgtacaaccttttcagtgcctacattgacaaggccctg
cgcagtgctctgcagaaacagatctgtcccctagtggctgatactattactgacatgaac
ccacacctcaaaactatcaatgttctagccaaagtggacaagtatgctgaagttgaatat
tccatggtgacatcacccaccatttcaaatacctccattgatttcagtttgaagggtgag
ttctacaacattgggaagcaccaggagcctccgttctcccccacgcccttctccctgcct
cctcaggtcaacaacatgctctacatcggaatgtcagccttcaccaccaactctgcaggc
ttcgtgtacaacaatgctggagcacttagcctctatatcaccgatgatatgatccctcca
agctctcccattcggctgaacaccagaacgtttggggccttcattccagagatagccaag
cgtttccctagcatgatgatgaagctgctggtgaagacggtgaaagagcccaccatcttc
tttgagcccaacaacgtgactgtccaggccagtggcagcgtgacggcctacgccatccag
cccaacaccaccctctctcccctcttcgtcctcaacatggagggtagtgtcagtgctcga
ctgtacgtgaccggggtgaagttggccggggctgtcactctgaacaaaattgagatgact
ctggaaacgagttatgtgggacagtttcaggttcgatctcttgacaacatcttcctgatg
gtcctgaaagtggctgtgataccaaaggtcaatgctcgcctagagaagggttttcccctt
ccctctattggaaagatgaaccttgtcaacactcagctgcaggtcctgaaggactacatg
ctgattgggacagacgttcagttcacaggataa
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