Oncorhynchus nerka (sockeye salmon): 115136935
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Entry
115136935 CDS
T07952
Name
(RefSeq) WD repeat-containing protein 20-like
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115136935
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115136935
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
PD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
115136935
NCBI-ProteinID:
XP_029528717
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All DBs
Position
LG11:complement(17969190..17976628)
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AA seq
661 aa
AA seq
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MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRGGLPRGLSAGTTVGPGGGPGSIPG
GGVGVVQGPGAASSNAAANSSPAGFLPPVRVSMVKLQPEDPSEESERVCFNIGRELYFYT
YTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSATADSVALIVGFSAGQVQYLDPIKKET
SKLFNEERMIDKSKVTCLKWLPKSENLFLASYASGHLYLYNVEHPCGTAAPQYSLLRQGE
GFAVYACKTKTPRNPLLRWAVGNGGLNEFAFSPDGVHVACVGQDGCLRVFHFDSMELQGV
MKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFTESRVVARGHGHKSWVNVVAFDPFTT
SLGDEEPMELSGSEEDLQQGPLHFGRVRTSSTLSRLSRHSSKGGSPSVTYRFGSVGQDTQ
FCLWDLTDDVLYPRLPLSRALTNTFGPTIPSSVSGTINNTTGGGSGGVVGGVEGHHHPTT
NPHQPPTMPLPLPRSLSRSNSLPHPAVANVSKGQSTTEGGGGSGGGNATPFSIGRFATLS
LQERKSDKSGGGGVGGEKEHKRYHSLGNISKSNDKINVAPRSSRLDAAKVLGTTLCPRMH
EVPLLEPLVCKKIAHERLTVLVFMDDCIITACQEGLICTWARPGKVNLTAQNGNSPSGTV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgatggaggcgctctgaaggatatcaatgagattaaatcccagttcaggact
agagagggtttttacaaactattgaccctctcggattcacaacaacgaggcggactacct
cggggtctgtccgcaggtaccacggtgggccccgggggtggaccgggttcgatacccggt
ggtggtgtaggtgtggtgcaggggcccggagctgcctccagcaatgcagcagccaactcc
tctccggcgggattcctccctcctgtcagggtctccatggtgaagcttcagccggaggac
ccgagcgaagaatccgagagagtgtgttttaacatcggaagagagctttatttctacacc
tacacaaatataaagaaagctgtggacctcagtaaacccatagacaagcgtatctacaag
ggcacccagcccacctgccatgacttcaaccagtactctgccacagcagacagtgtggcc
ctcattgtgggcttttcagcaggccaggttcaatacctggaccccattaagaaggagaca
agcaagctcttcaatgaggagaggatgatagacaagtccaaggtaacctgtctgaaatgg
ctgcccaagtcagagaatctgttcctggcctcatacgccagtggtcacctctacctctac
aacgtggagcacccgtgtggcaccgccgccccacagtactccctgctccgccagggcgaa
ggctttgccgtctacgcctgcaagacaaagacgccccgaaacccgctgctgcgctgggcc
gtaggaaacggaggccttaatgagtttgccttctcgccggacggcgtgcatgtggcatgc
gtgggccaggacggctgcctgcgtgtcttccactttgactccatggagctgcagggcgtg
atgaagagctacttcggcggcctgctgtgcgtctcctggagccctgatggcaaatacctg
gccacgggcggcgaggacgacctggtgacggtgtggtcgtttacggagagccgtgtggtg
gcccggggacacggccataagtcctgggtgaatgtggtggcctttgaccccttcaccacc
agcctgggggacgaggagcccatggagttgagtggcagcgaggaggacctacagcagggg
ccgctgcactttggccgcgtgcgcaccagcagcacgctgtcacgcctctcccgccacagc
tccaagggcggctcgccctccgtcacctaccgctttggctcggtgggccaggacacccag
ttctgcctgtgggacctgacggatgacgtgctgtacccacggctgcctttgtcccgtgcc
ctcaccaacaccttcggtcccaccatcccctcctctgtcagcggcaccatcaacaacact
acaggcggagggagtggaggggtcgtaggcggggtagagggccaccaccaccccaccact
aacccccaccagccccccaccatgcccctgccactcccccgctccctgtcgcgctccaac
tccctcccgcaccccgccgtggccaatgtctctaagggccagagcacaacagagggcggg
ggagggagcggagggggcaacgccacccccttcagtatcggccgcttcgccacgctctct
ctgcaggagcggaagtctgacaagtctggagggggcggggtgggcggggagaaggagcac
aagcgctaccatagcctgggaaacatcagcaagagcaatgacaagatcaacgtagcgcca
cgcagcagtcgcctggacgccgccaaggtcctaggcaccaccctgtgtccgcggatgcac
gaggtgcccctgctggagcccctggtgtgtaagaagatcgcccacgagagactgaccgtg
ctggtgttcatggacgattgcatcatcaccgcgtgccaggagggcctcatctgcacctgg
gcacggcctggtaaagtgaacttgacagcacagaacgggaactctcccagtggcacggta
gtatag
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