Oncorhynchus nerka (sockeye salmon): 115136975
Help
Entry
115136975 CDS
T07952
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115136975
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115136975
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Contactins
115136975
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Others
115136975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
115136975
NCBI-ProteinID:
XP_029528789
LinkDB
All DBs
Position
LG2:complement(26617930..26708901)
Genome browser
AA seq
1022 aa
AA seq
DB search
MKMLLPWELLILLSLTDCLAERSARHGPVFTQEPSDSVFPLRSEDNKVFINCKAKGNPVP
HYKWKVDGGYIDMDLNYNLVEGNLLINHPHATHHGGVYQCIATNVFGTIVSREAKVQFAY
LQNFSRKSRNTVSVREGQAVVLLCGPPPHNGEIKYSWVFNGRPSFLLQDTRRFVSQRTGN
LYIAKVEASDVGNYTCVVRNMMTNATAYSSPTPVVLRRDAVMGEYEPKIEVQFPESLHVT
KGSSVKLECFALGNPVPSITWRRTDGNPLPGKIKINHSNGVLEIPYFRPEDAGVYECVAE
NSRGRNVAKGQLVFQSVEHLQWVQTLKDVHMAIEANLQWECKASGKPKPVYRWLKNGEPL
VLEDRILVEGGRLAVPTINLLDSGMYQCLAENEHGAIYASAELKVVASPPDFSSSPVKKS
MLIQRGGEVIMECRPHASPRASISWRRGGEFLKDSTRRTIMGDGTLRISNISESDGGRYT
CVARNPFGTSSSTGTLVVKEPTKITVPPLSVDATVGESIVLPCEVSGDSSLDPTFKWFFN
GKLIDFNRQDHFEMIGVGSAGDLMVRNIQLKHSGKYVCMVHTVVDSVSAAAHLIVRGPPG
APEGLIVGEITDSTAQLSWESGPDHHSPVTTYSIQARTPFSIGWQAVRTVPDSVPGQMFH
ATVIDLNPWVDYEFRVVASNNVGVGEPSMQSKQIRTKAAVPEVAPGNVSGGGGRRGELVI
QWEPIPEELQSGEEFGYVVAFRPLGTSTWKQTVLASPDASRYTFRNDSVPPLSQFEVKVG
VYNNKGEGPSSHVVVVYSAEEEPSEPPSRVWTRTLSASEIEVYWEPITQTAISWKIIGYE
VLCWEEGMQESDAEMVRVTDPAALLSGLKGSTVYLISVRAQNSAGAGPSSPAVNVTTKKP
PPSQPPGNIEWNLTNSKIFLSWEHVKAMGNESEVTGYKVLYRQNWLGKTSVVETNRTSMA
LQVPSGEDYLIEIKALSDGGDGSSSGPIRIPKMSSLNSNGHFSSAPCNICAVMFFILSKL
TL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgttgccatgggaactgttaatccttctgtcactcacggactgccttgct
gagagaagcgcacgccatggacctgtcttcactcaagaaccaagtgacagcgttttcccc
ctgaggtctgaggacaacaaggtgttcatcaattgtaaagcaaaggggaacccagtcccg
cattataaatggaaggttgatgggggatatattgacatggatttgaactacaacctggtt
gagggaaacctgttgatcaatcacccccatgcaacacatcacgggggcgtttaccagtgt
attgctaccaatgtctttgggaccatcgtcagcagggaggccaaggttcagtttgcatat
ctgcagaacttcagcagaaagtccaggaacacagtgtcagtgagagaaggccaggctgtg
gtgctgctatgtggccctccaccccataatggagagatcaaatactcgtgggttttcaac
ggacgcccaagtttcctgctgcaggatacccgtcgcttcgtctcccagaggaccggcaac
ctgtacatcgccaaagtggaggcctccgatgtggggaactacacgtgtgtggtgaggaac
atgatgaccaacgccaccgcgtacagctcgcccacccccgtggtgctgcgcagggacgct
gtaatgggagagtatgagccaaagattgaagttcagttccccgaaagtcttcatgtcacc
aaaggatcatcagtgaaactggaatgtttcgccttaggaaacccagtgccttccatcaca
tggaggagaacagatgggaatcccctccctggcaagatcaaaatcaatcattccaacgga
gtcctggaaataccatatttcagaccggaggatgctggtgtatatgagtgtgttgcagag
aactccagaggaaggaacgttgccaaaggacaactcgtattccagagtgttgaacatctg
cagtgggtccagacgttgaaagatgttcatatggccatcgaggctaatctccagtgggag
tgcaaggcgagcggcaagcctaaacctgtgtacagatggctgaagaacggggagcccttg
gtgctggaggacaggatactggtagaaggtggacgattggccgtccccacgatcaacctg
ttggactctggtatgtaccagtgtctggcagagaacgaacacggcgccatctatgccagc
gctgaactcaaagttgtagcctctccacccgacttctccagcagtcctgtgaagaagtcc
atgctgatccagagagggggggaggtgatcatggagtgccgtccccatgcgtcccctagg
gcatccatctcctggcggagagggggagagtttctgaaggacagcacgagacggaccatc
atgggggatggaactctccgtatcagcaacatcagcgaatcagacggagggaggtacacc
tgtgtggccaggaacccctttgggacatcaagcagtactggtactctggtggtgaaagag
ccgaccaagataacagttccaccgctgagtgtggatgccactgtgggagagagcatcgtg
ttgccatgtgaagtgtctggagactcctccctggatcccacctttaagtggttcttcaac
ggcaagctcatcgatttcaacagacaggaccactttgagatgataggagtgggatcagct
ggtgatctgatggtcaggaatattcagctaaagcattctgggaagtatgtgtgcatggta
cacactgtggtggacagtgtctcagcagcagcccacctgattgttagagggcctcccggt
gccccagagggccttattgtgggggaaatcactgactccactgcccagctctcctgggag
tctgggcctgaccaccacagccctgtcaccacatacagcatccaggccaggacccccttc
tccataggctggcaggccgtcaggacagttcctgattctgtgcctggacagatgtttcat
gcaacggtgatagatttgaacccctgggtggattacgaattcagggtggtggctagcaac
aatgtgggtgttggagagcccagcatgcaatccaagcagattcgaacaaaagcggcagtt
cctgaagtagcaccaggtaatgtgagtggaggaggaggaaggcggggagaactggttatc
caatgggagccaataccagaggagctacagagtggagaggaatttggatacgttgtggct
tttcgtcctcttggtacaagcacatggaagcagactgtgctggcttcacctgatgcatca
agatacaccttcaggaacgacagcgtccctcccctctcccaatttgaggtgaaagttgga
gtctacaacaacaaaggagaaggcccgtctagccatgtggttgtagtgtattccgcagag
gaagagccctctgaacccccgtccagagtgtggacccggacgctgtcagcctctgaaatc
gaggtgtactgggaacccattacccagacagccatcagttggaagatcattggatatgag
gtcctttgttgggaggaggggatgcaagagagtgatgctgagatggtgagggtcacagac
cctgcagcccttctctctgggctcaagggcagtactgtgtatctgatctcagtcagggcc
cagaacagcgctggagcagggccttctagccccgcagtcaacgtcaccaccaagaaacca
ccaccaagtcaacctccagggaatattgagtggaacttgacaaactccaagatctttttg
agttgggaacatgtcaaggcaatgggaaatgagtctgaggtgacaggatacaaggtgctg
taccgtcagaactggcttgggaagaccagcgttgtggagaccaacaggaccagcatggca
ctgcaggtcccctctggtgaggactacctcattgagatcaaagccctgagtgatggaggg
gatggcagcagcagtggccccatcaggataccaaagatgtccagtcttaactcaaacggc
catttcagctcagctccatgcaatatttgtgcagttatgttttttatactttcaaagttg
actttataa
DBGET
integrated database retrieval system
