KEGG   Oncorhynchus nerka (sockeye salmon): 115136985
Entry
115136985         CDS       T07952                                 
Name
(RefSeq) ARF GTPase-activating protein GIT1-like isoform X1
  KO
K05737  G protein-coupled receptor kinase interactor 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04144  Endocytosis
one04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115136985
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115136985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115136985
Membrane trafficking [BR:one04131]
 Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    115136985
 Endosome - Golgi transport
   Arf GTPase associated proteins
    115136985
SSDB
Motif
Pfam: GIT1_C GIT_CC ArfGap GIT_SHD Ank_2 Ank Ank_4 Ank_5 TTRAP Shugoshin_N T7SS_ESX_EspC
Other DBs
NCBI-GeneID: 115136985
NCBI-ProteinID: XP_029528796
LinkDB
Position
LG11:complement(20409965..20435917)
AA seq 763 aa
MSRKVHRTEVCADCSASDPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPAL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLSFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGALDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRENDAVWLTTQ
NHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDAKRRQQGKGL
SSPTDSSLDLAADDDQHDYDSVASDEDTDSELTTQNNNNAQRNNRAKSMDSSDLSDGPIT
LQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEISRMQTENSALRGGQVGGGGGA
GGLGGGGGGSPAHWPGGVRGGGGRGGDHSSLAVSSAVPSHRRDRQAFSMYEPGAATPKPH
SHSPGLDSLTGRLQPLHPSVRKGGPGGPTPYGGSHLSGSMEMGRYMGPKGEKHGSGTDSD
YDNTQMYELSLSRGRSSEEEGRGDSEEWGGGEGGEPDPTLPCTEDVILKTEQVTKNIQEL
LRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKRPALDAVHCSLRLLASSASRLQVECRKA
DPSDSSAPAVDYQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgtcaagaaaggtccacagaaccgaagtatgtgccgactgcagtgcatcagatccgggc
tggaccagcatcaacaggggcgttctgatctgtgacgagtgctgctctgtgcaccgcagt
ctgggacgccacatctccatcgtcaagcacctgcggcacagcggctggccccctgcactg
ctgcagatggtgcagaccctggccagtaatggggctaactcgatttgggagcactccctg
cttgacccagcgcaggtgcagagcggccgcaggaaacccaacccacaggacaaagtccac
cccaccaagtccgagttcatccgcgccaagtaccagatgctatccttcgtccacaagctg
ccgtgccgcgatgacgacggtgttaccaccaaggacctcagtaagcaactgcactccagt
gtgaggacggggagtctggagacatgtctaaggctgctgtccctgggagcacaggccaac
ttcttccacccggagaagggcaccactccactccacgtggcagccaaggcaggccaggtt
ctgcaggcagagctgctggtcgtgtacggagccgaccccggagctctggacatcaatgga
cgcacacccatggactacgccaggcaagcgggccaggtggagctggcagagcggctggtt
gagtgtcagtacgagctcacagacaggctggccttctacctgtgtggccgacgccctgat
cacaagaatgggcattatatcattcctcagatggctgacagcctggacctctcagaactg
gccaaggcagctaagaagaaactgcaagcgctgaacaatcgattgtttgaggagcttgcc
atggatgtgtatgacgaagtggaccgcagggagaacgatgcagtgtggctgacgactcag
aaccacagtactctggtgacggagcgcagcgcggtgcccttcctgcctgtcaaccctgaa
tactcagccacacgcaaccagggtagacagaagttggcccgttttaacgctcgtgagttc
gcaacgctgatcatcgacatcctgagtgacgccaagaggagacaacaagggaaaggcctg
agcagccctactgactctagtctggacctggcggccgacgacgaccagcatgactacgac
agcgtagcgtcggacgaggacacggacagcgagctgaccactcagaacaacaacaacgcg
cagcgcaacaaccgggccaagagcatggactcgtcagacctgtcggacgggcccatcact
ctgcaggagtacctggaggttaagaaggccctggcatcctccgaggctaaagtccagcag
ctgatgaaggtcaacaacaacctgagtgaagagctgcgccggctgcagaaagagatctcg
cggatgcagacggagaacagtgcgttgcgggggggccaggtcggaggaggagggggagct
ggcggtttgggaggcgggggaggaggcagccctgcacattggccagggggggtgcgaggc
gggggaggtaggggaggggaccactccagcctagctgtgtcctcagctgtgccttcccac
cggagggacagacaggctttctctatgtacgagccgggggccgccacccccaaaccccac
tcccactccccaggcctggactccctgacgggccgcctgcagcctctgcaccccagtgtg
aggaaggggggtcctggcggtccaacaccctatggagggtcgcacctctctggctccatg
gagatggggagatacatgggtcctaaaggagagaagcacggcagtggcactgatagtgac
tatgacaacactcagatgtatgagctgtcgctaagtagggggcgcagcagtgaagaggag
ggccggggggattcggaggagtggggtgggggtgaagggggtgagccggacccgaccctg
ccctgcaccgaagacgtcatcctcaagacggagcaggtgaccaaaaacatccaggagctt
ctgagggccgcacaagagttcaaacacgacagttttgttccatgctctgagaagatccac
tctgctgtcactgaaatggcctctctctttcccaagcggcctgccctagacgctgtgcac
tgctccctgcgcctcctggcgtccagcgcctcccgcctccaggtggagtgtcgcaaggcg
gatccctcggactcctcagcgcccgccgtcgactaccagctgctcacccagcaggtcatc
cagtgcgcctatgacatcgccaaggccgccaagcagctggtcaccatcaccacccgcgag
aagaaacagtga

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