Oncorhynchus nerka (sockeye salmon): 115136991
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Entry
115136991 CDS
T07952
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115136991
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115136991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Pes-10
DUF4746
F-box_5
KIND
Motif
Other DBs
NCBI-GeneID:
115136991
NCBI-ProteinID:
XP_029528810
LinkDB
All DBs
Position
LG11:20741965..20745369
Genome browser
AA seq
488 aa
AA seq
DB search
MNYPEDPEEQLSEDENEEEEEGEDEGIEIMDEEEEEEGEAEENEEPKLGWANLPDVCLRQ
VFWWLRDRDRVKAALVCLHWHHVMRSPSLWRVRTFNFSGRISRTRRSELETAVCYAKTYG
AYLEDLEIRFSHPLNSLVSRRFQQTLRTFLAALRKTRGGLRRLTVNHMELDRAAWCRSVR
KALVRSLTFYLRRESSRLGYLSLRGARLNLPQGLEVLEAVAASQQHIHLGRRPGITHLNL
EDFFSQPLAVFISPAFPQVMNRFQGLCTLTLNYSCLSDELLAALSAACRSLDGGGSLQTF
TIRCHIHEPHIQVVWGDAWSHLAQRCPNLRVHITVERILDMDKLGRILLREIPLRSLSLT
SCYFSEQDWSVKPALTNLVPYYRSCLQKLTLDLNNSHESVDEELLEVVLLCSQLVYMKVW
AFLDISFLDRLLQKRLEKKIVLRTIKVRIYINKYETQDEDEQLEEVYSRYRQLINSELHY
FAISYPML
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccccgaggatccagaggaacagctctcggaggatgaaaacgaagaagaagag
gagggggaggatgaaggaatagagataatggatgaggaggaggaggaagaaggcgaggcg
gaggaaaatgaggagcctaagctgggctgggctaacctcccggacgtgtgtctgaggcag
gtgttctggtggctgcgtgaccgtgaccgtgtcaaggcggccctggtgtgtctccactgg
caccacgtcatgcgctcgccctctctctggagggttcgaaccttcaacttctccggccgc
atctccaggacccgccgctcggagctggagacggccgtgtgttacgccaagacctacggc
gcttacctggaggatctggagatccgcttctcccaccccctcaactctctggtgtcccgg
cgcttccagcagacgctgaggaccttcctcgccgcgctgcgtaaaaccagaggcggacta
cgccgcctaactgtcaaccacatggagctggaccgcgccgcctggtgccgcagcgtacgc
aaggcgctggtgcgcagcctcacattctacctgcgccgcgagagctcccgcctgggctac
ttgagcctgcgaggggcccgcctcaacctgccccagggcctggaggtgctggaggccgtg
gctgcatctcagcagcacatccacctgggccgccggcccggcatcacccacctcaacctg
gaggacttcttctcacagccgctggccgtcttcatcagccccgccttcccccaggtcatg
aaccgcttccagggcctctgcaccctgaccctcaactacagctgcctgtcggacgagctg
ttggcggccctgtccgcggcgtgtaggagcctggacgggggagggtccctgcagacgttc
accatacgatgccatatccacgagccccacatccaggtggtctggggggatgcctggtcc
catctggcccagcgttgtcccaacctccgtgtgcatatcacagtggagcggatcctcgac
atggacaagctggggaggattctgctcagagagatcccgctgcgctcgctcagtctcacc
agttgctacttcagtgaacaggactggagtgtcaagcctgcccttaccaacctagtgccc
tactacaggagctgtttacagaaactgaccctggacctgaacaacagccacgagtctgtg
gacgaggagctgctggaggtggtgctgctgtgcagccagctggtctacatgaaggtctgg
gcattcctggacatcagcttcctggaccggctgctgcagaaacgcctggaaaagaagatc
gtcctaaggaccatcaaggtgcggatctacatcaacaaatatgagactcaggacgaggat
gagcagctggaggaggtgtactctcgctacagacaactcatcaactcagagctccactac
tttgccatctcctaccccatgctctga
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