Oncorhynchus nerka (sockeye salmon): 115137043
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Entry
115137043 CDS
T07952
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115137043 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115137043 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115137043 (sptbn4)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115137043 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
115137043 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
TMP_3
Motif
Other DBs
NCBI-GeneID:
115137043
NCBI-ProteinID:
XP_029528909
LinkDB
All DBs
Position
LG11:22111023..22180145
Genome browser
AA seq
2737 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDSAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LAAQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYTEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELGPVVRRKLGEIHECWQDLESTTQAKARQLFEAN
QADLLVQSYTSLDHQLHQLEGQLGYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASVPQQGQVMDTVSERQSAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLNGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQCQMDRLYV
SLKDLVEERKSRLEQQYWFYQLNREVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREVLAQIDDKQRRLPEVRARQGGTANTSTLQRLMQSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPSSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDTVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRILYEQAEPRAERPPLEPSPSS
VARRLGSTVANYTPIMNGSSGYRSSLEARAIPVMGGVAGGVVGVAARLGTAAVEATNLGT
TAAMEVRGVAAGFGTATSEARGLAAGLVTPAVEAKGIAASLVTGAAAAVEVKASQYLRQP
KIKHMDDMVTPMLVACRLEKAREKEVREREQRERERDIVLMEPAPVMPVMAEVVLQEMGR
EVMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEALMIQA
RRDELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSD
RRSTEKKSGGQTLFDIVEQLKEREAATARGEVSKVPNGVPEKSSGRPDRPRARDRPKPRR
RPRPKDPSAGEATTRRSRSAPEPGVAQGVSPSVPQPPSHTAHHEGFLFRKLDIETMRKSS
NSRSWVNLYCVLNKGEIGFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKT
KDGSEFLFHAKDESQDDLKAWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKAD
NKSDRGERPERAERSERSDKGETKSDTKRSEKSSKKK
NT seq
8214 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagatctggacaacgcggaggcccagcgccagctcaacaacaac
aacacccgtctggccagcagctcgggacactgggaaaccgaggtcaccagttccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggattgctgacctctac
aacgacctccgggacggctacatgctcacaaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgttggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggggattaagatcgagtgtgacgacaacagggagactcggtcggcaaaggatgcccta
ctactctggtgccagatgaaaaccgctgggtactctgaggtcaacatccagaacttcacc
acgtgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgagttccataagctgatccggtccaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtcttggacagtgccattgac
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccaaaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgccccatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggaacacgagagaggcgtggcactacggcaggagctgattcgccaggagaag
ctggagttgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaagcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggaaggctactacgacatccggcgcatc
tcggcccgaaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggctggagaagaacctggccctgcagaagaccttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttccaaagacttcggcaagcat
ctgctggaggtggatgacctgctgcagaaacacagcctccaggaagctgacatcacagtg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccacgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctt
tgggcattcttccaggaagtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggccgcccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagttttggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaacttcttccagttcagcacggagacggacgacttgttggcttggttg
caggacgcctaccgcctggtttccagcgaggactttggccacgacgagtactccacccag
tcactgctcaagaagcaccggggtgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcaagaatgggcgaggcggagcagctgtacaccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgatgagaaggagcagtggcttaacaagatggaggttccagagagg
ctggaggacgtggaggtcatagcccataggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagattaagtcccaaatccaggagaagcgcaaggccatcgacgcc
actcagtacgtggggagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gaactggccatctcgcacccggccaaggccatggaggtcctggagcccttcgagggcatc
agtgtagagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggcagagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggcgccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaaactgctagagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccctggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggagctggcccaacagtggctggagaggctcaacggccagtgggggctccagagatta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggctttcatg
gccgagctggcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgggtccggtggtgcggaggaagctgggggagatccacgag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
caggctgacctgctggtgcagagctacaccagcctggaccatcagctgcaccagctggag
ggacaactgggctatgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccgtcccccagcagggccaggtcatggacacggtcagcgagcgccag
tccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagcctacaggctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctacagggccatcgggcgagg
gtggaggacgtcctggaaagagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcaatgggctgtggggtctgctgtgggccgagacg
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaaggga
aaggatgagcccagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcaggcagctactggagatg
ggacatccagacagtgagcagatcagtaagcgtcagtgtcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagagaaagtctcgtctggagcagcagtactggttctac
cagctcaaccgcgaggtggacgagctagagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggacgagctgatcgactacggccacgccgacgccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgaggtcttggcccaaatt
gatgataagcagcggaggttgcccgaggtgcgggcgcgccagggtggcaccgccaacacc
agcaccctgcagaggctcatgcagagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacttcc
tgcgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccctccagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggatacggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcctggctcacagcccaggagcccttcatcaacagcaag
gagttgggcgccagcgtggacgaggtggagcagctcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcgctacgacgcctcaccacggtggag
aagatgaaagcagagcagagtaagctccctcccacccccctgctgggtcgtaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctcccccctgatgagacggatc
ctttacgagcaggccgagcccagagccgaaaggccccccctggaaccctcgccctcttcc
gtggcccgccgcctgggctccaccgtagccaactacacccccatcatgaacggctccagt
ggctaccgcagcagtctggaggcccgggccatcccagtgatggggggagtggctgggggt
gtagtcggggtggcagccaggctgggaacagctgctgtggaggcaacaaatttagggacc
accgccgccatggaggtccgaggggtggcagcaggatttgggactgccacctctgaagcc
agagggttggcagcaggattggtcacccccgcggtcgaggccaaagggatagctgcaagc
ttggtgactggggcagccgccgcagtggaggtgaaagcctcgcagtacctccggcagcct
aagatcaaacacatggacgacatggtgacgcccatgctggtggcctgtaggctggagaag
gcgagagagaaggaggtgcgagagagggagcagagagagagggagagagatattgtgtta
atggagccagcgcccgtgatgccggtgatggccgaggtggtgctccaggagatggggagg
gaggtgatgggaagggagaggctgaacagcgagcccagcagcagagaccaccgggcgggg
agcagccggtcggagccccagcagagagacagggacagagacagtagggacagtagggac
agtcacagggaagccaggctggagcgccagcactctagtgaggcgctgatgatccaggcg
cggcgggatgagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagaggaag
ctggaaaggcagacgtccagcgagcaggagggccacggacacgagggccggaggaaagac
cgccaccggacagaaagacaggagtccagtgaacacgacacagccaaggagcagtcagac
agacgttctacggagaaaaagtcaggtggccagaccttgtttgatatagtggagcagcta
aaagagagagaggcagcaacggcacgaggggaggtctctaaagtgccgaacggcgtgcca
gagaagtcttccggacgtccagaccggccgcgagcaagggatcgtcctaagccccggcgg
agaccccggcccaaggacccatctgcaggagaggccaccacccggcggtcgcgctcggcg
ccggagccaggggtggctcagggcgtgagcccttcggtcccccagcctcccagccacaca
gcccaccacgagggcttcctcttccgcaagctggacatcgagaccatgaggaagagctct
aacagcagatcctgggtcaacctgtactgtgtgctgaacaaaggagagataggcttctat
aaggacgctaagaacaccgccacaccttacaacaacgagcccatgctcaacctcggccac
tgccactgcgacgtcacccttggatacaagaagaagaaaaacgtctttactcttaaaacg
aaagacggaagtgaatttctgttccacgcaaaggatgagtcacaggatgatctaaaggcc
tggaccaccaacatcaacaagagcatcgcagagcatgaggagattgccaaatggggtcag
ccccagcctactacctcatccacggacgagggcacgcgccgcgacggcagcaaggccgat
aacaagtctgacaggggggaaaggccggagagagccgagcgctctgagaggtcggataag
ggtgagaccaaatcggataccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
