Oncorhynchus nerka (sockeye salmon): 115137047
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Entry
115137047 CDS
T07952
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115137047
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115137047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
115137047
NCBI-ProteinID:
XP_029528921
LinkDB
All DBs
Position
LG11:complement(22203931..22271616)
Genome browser
AA seq
2176 aa
AA seq
DB search
MSSRRYANFFVLGVTFLVFLTFSKCGTLVRRSARKGHEMQRRTAGRYQHATVNDQVYQTQ
RRMTTTSKPKLKQKQYHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKCTKP
RCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWAFLRPTSPMVSTTTTLS
PSITLSPTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKKALARGGRG
DKMTSILMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHVSPPAARNQTAGH
RGGTAAGAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAVLGPG
FRVFLCPMLCQNGGVCIQKDRCLCPLTFTGKFCHIPVATPSTNDIEKPPRSPSVLASQQL
LSQSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQS
ETVTWSAGLSGASTSVLPGERAAATPPKPRVQAQTLHGNSTNTESSVFKYCFREVRNGQC
SSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECL
QPGFCENGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKGQCYRILNSGSGRGSC
SVPILRNITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRL
LEQHGTGGPPVISQSTGQTRPQQPASSGAQTPQTSHQQSSGSLTPQIRPQQPGISTLLTT
PTRPQQPGGGALTLPTRTQQPSVEQWSSGGSLSSQGRAHIPASSVTAGPTRVVTGPVLVS
PARPLTQTQWPPVDRRPVSPVRPAQPLPPLVTPRPPIPRPVRGVCETMPQVCGQGRCVNQ
PGGRHTCICNEGYQLNAQQTRCQDIDECRASPPPCGSGRCQNTEGGYRCSCPSGYQPGPR
GTSCIDIDECRQVPNPCNNGRCENSPGSFKCVCRTGYALEGNACKDVDECEDPLRCPVQA
CANSPGSYKCVSCPPGFGLLNEQCSDVDECHQTPSLCTNGRCENNPGSYRCVCHTGYKLQ
GKTCTDVDECEDPLRCPGQACVNSQGSYNCVSCTPGFSMINGQCSDIDECRQTPGPCTTG
HCENTQGSYSCACLTGYRLHGDTCTDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGPV
DRHCTDVDECLRSPTPCANGRCENTAGSYKCACRSGFRLQGNTCGDVDECENALQCPGRQ
CINSEGSFICVACSPGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYRCVCRTGFKPQ
GSICIACFILDLDECEDPSQCPGQRCVNSEGSYKCIACKAGHGMRDGLCADVDECQSPDT
CGAARLCVNTDGSYRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRCVC
SQGYTTSSDGSSCLDVDECARSGPGSCQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVD
ECSEGAVCRSQRCENTVGSYRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQNLI
GTYQCMCDQGYTATSDGKGCVDENECETMQGVCGAARCENVDGSFMCECPGEGEEFDTRS
GQCLSTPRPGRPAYPGGSSSSSSSSTTGLGPQRRPDASQLPPARPGEFRECYYSTGEQSS
CSILARNTTQQECCCTVGQGWGMGCQYDPCPPLGTAEHQALCPSGRGYVTGPGAFSYKDV
DECKLFHPEVCKSGVCVNNIPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGICVN
ILGSHFCTCEPPLVLDDTQRSCVNSTDLAVDENLSFCWQFVTADLVCQSPLLGGQVTFTE
CCCLYGEGWGLHCALCPARDSEDYEARCNVFLGPPEFPPPFPDPYGPDPGPGPGRGGEGG
GGVGYRVPNGPDSFPDPIPRRPEYPQPDYDDYTPAGGSRSGFRSRTPSTFSVPESPYRRP
SGYIPERYYDEDDYGPPDAPPRPHFRTLPDPRSELAFGVRPPPPIREGLPLSLAPLSDSD
PYSEEEEEEEEGPEPWRVGPPFPPFPDRQGPGGGGGPRRVYERRYEPYAGLSTEDCGILH
GCENGRCIRVAEGYTCDCYEGYELDMTSMACIDINECVDPDNACANGRCIDTDGSYRCVC
HRGYVMSRRPNHCVAA
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaactttttcgttcttggagtgacatttcttgtatttctt
acattttcgaaatgtgggacactagtgaggcgatcagcccgtaaagggcacgagatgcag
aggcgaacggcgggcaggtaccaacacgcaaccgtgaatgatcaagtttatcagactcag
aggagaatgacgacgacttcaaaacccaaattaaaacagaaacagtaccattttaatgga
aagaaatactggaaatacgcaactaatgtcacacttcagttaaatgggactaacgtatgt
ggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcaccaaacca
agatgccttccacgttgccacaacggagccgtgtgcaggcagcccaacatctgtgaatgc
cgaacgggcttctacggggcccgctgtgagtttgcaagcgtgacctatggcctcgtaggc
ctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccaccaccctttca
ccaagcatcaccctctcaccaaccaccgtcatccccaacaccactccagtgcccactgag
accacagctgcatggaggacagaggggacaccagtcagcactgtgcgctggaaacctctt
actctgcaggaggctcagtcagtgctgctaaagaaggcattggcccgtgggggccgaggc
gacaagatgacctccatcctgatgaaacacatcgagacagagcggaagaagcttcaatca
gcctcaccgtcagacctacaggacacccggaccaccagtgtcaagagcttccacacccag
aagggccagtacaccatccacgtgagcccacctgcagccagaaaccagaccgccggccac
cgaggaggaacggcagcaggggcaggaaggagaggagctgagcgcatcaaggtgctcttc
accccgaccgtctgcaaggtgcgctgcacccagggacgctgcaccaacttctgcgagcag
ggcaatgtgaccgccctctacatcagtgaacagggggaccgggctgtgctgggaccgggc
ttcagagtcttcctgtgccccatgttgtgtcagaacggaggggtctgcatccagaaggac
cgctgcctctgcccgctaaccttcaccggcaagttctgccacatccccgtggccacgccc
tccaccaatgacattgagaagcctccgcgcagcccctcggtgctggccagtcagcagctg
ctgtcccagtcggagtacattctccccctgcagagccagcagcagagccacagtcagccc
agcggtgcatctggctcatccatggtgaaggtgcgggtgcagcacccaccagaggccagc
gtgaagatccaccaggtgctgaaggtgggctatgggccaggcacggttagggagcagtcg
gagacggtcacctggtcagcaggcctctcgggggccagcaccagtgttctgccaggggag
agggccgcagccacaccacctaaacccagagtccaggcccagaccctccacggtaactcc
accaacacagaatcttctgtgttcaagtactgcttcagggaggtccgcaacggccagtgc
agctcacctctcccaggactgaggagtcaggacacctgctgcagagggattggactggcc
tggggcatcaacgagtgtgtcctatgtccccctaacacaggaaatggagtcgatgggagc
tgtccggctggatttgagaggatcaatggcacccagtgtgttgatgttaatgagtgtttg
cagccaggcttctgtgagaacggcaactgtgtgaacactcgagggagctacagttgtgtc
tgcaggcaaggatacatactggatgcctctcacgggatctgtatctcccatagggtgatc
tcggaggataagggccagtgctatcgtatcctgaactctggctctggccgtggtagctgc
tccgtgcccatccttaggaacatcaccaagcagatctgctgctgtagccgcgtgggcaag
gcctggggagagaactgtgagaggtgtccttactttggatcagttgctttcaaggagatc
tgcccagcagggcctggctaccactactctgcctctgtcatccagttcaaccagaggttg
ctggagcagcacgggactggaggtccccctgtcatatcccagagcacgggacagaccagg
ccacaacaaccagccagtagtggtgcacagactccccaaactagtcaccaacaatcttca
ggctctctcactccccaaatcaggcctcaacaaccaggtatctctactctgctcaccact
ccgaccagaccccaacagccaggtggtggcgctctcacgcttccgaccagaacccagcag
ccatcagtggagcagtggagcagtggaggctccctgtcctcccagggcagagcacacatt
ccagccagctctgttacagcaggacccacccgggtggtgaccggtccggttttggtttct
ccagctcggcccctcactcagacccaatggcctccagttgaccgacggccagtatctcca
gtgagacctgcccagcccctcccacctctggtcacgccccgcccacccatccccaggcca
gtgcggggtgtgtgtgagaccatgccccaggtgtgtggacagggccgttgtgtgaaccag
cccggagggagacatacctgcatctgtaacgagggataccaactcaacgctcagcagact
cggtgtcaagacatagacgagtgcagggcgtctcccccgccctgcggcagcggccgctgc
cagaacacagaagggggctacaggtgcagctgcccctctggataccagccaggaccccgg
ggcaccagctgtatagatattgacgagtgtcgtcaggttccgaacccctgtaacaacggc
cgctgtgagaatagccctggtagcttcaaatgtgtctgccgcactgggtacgcgctagag
ggaaacgcatgtaaagatgtggatgagtgtgaggaccccttgaggtgtcccgttcaggcc
tgtgccaactctccaggatcatacaagtgtgtgtcttgcccgccaggctttggcctgctc
aacgaacaatgctcagacgttgacgagtgccatcagacccccagcctttgcaccaatggt
cgttgtgagaacaatcctgggagctacaggtgtgtttgccacacaggatacaaactacaa
ggcaagacctgcacagatgtggatgagtgtgaggaccctttgaggtgtcctggtcaggcc
tgtgtcaattctcagggttcttacaactgtgtgtcctgcacgccaggcttcagcatgatc
aatggacaatgctcagatatagatgagtgtcgtcagacccccggcccatgcaccaccggt
cactgcgagaacacccagggtagctacagctgtgcgtgtctcactggctacagactacac
ggtgatacctgtacagacgtggatgaatgtgcagacccgtcccagtgccctggccaggag
tgtgtcaactccctgggctcatacaagtgtgtgtcctgcaagccaggctttgggccggtc
gacagacactgcacagatgttgacgagtgcctccgcagccccactccctgcgctaacggc
cgttgtgagaacacggctggaagctacaagtgtgcgtgccgatctggcttcaggctacag
ggcaacacctgcggagatgtcgatgagtgtgagaacgctctgcagtgtcctgggcggcag
tgtatcaactctgagggctccttcatatgtgtggcctgtagcccaggctttgaggctgga
aacggacagtgtacagatatcgatgagtgtcgccagacctccaacctatgtgccaacggt
cgctgtgaaaacactccgggtagctaccggtgtgtttgtcgcaccgggttcaaaccgcag
ggcagcatctgtattgcttgcttcattttagacctggatgaatgtgaagacccctcacag
tgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtatcgcctgcaaagcg
ggccacggcatgcgagatgggttatgcgcagatgtggatgaatgccagagccctgacacc
tgtggtgcagcgaggctgtgcgtgaacacggacggctcctaccgctgtgactgtcagcca
ggctacagaaccgctggcctcggacgccagtgtagagacgtcaacgagtgtctagagggg
gagtactgcttccccaggggagagtgtgtgaacacagagggctcctaccgctgtgtgtgc
tcccagggatacaccaccagcagcgacggcagctcctgcctggatgtggatgagtgtgcc
aggtcaggcccggggtcgtgccaggatggccgctgtgtcaacacagagggctcctaccag
tgccagtgccaagtgggattcaccaccaacccagagaagacagcctgtctggatgtagat
gagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaacaccgttggctcctac
cgctgtatcacctcctgtgagccgggctaccgggtcacccgcaccggagagtgcgtcgat
atcaatgagtgtgccaatgagaccgtatgcggggagcatgcgttctgccagaacctaatt
ggaacataccagtgcatgtgtgaccagggctacacagccaccagcgatgggaagggatgt
gtggatgaaaacgagtgtgagactatgcagggcgtgtgtggcgcggcgcgctgtgagaat
gtggatggctccttcatgtgtgagtgtccaggagagggggaagagtttgatacgcgctca
ggacagtgcctcagcacgccccgaccaggtcgtccggcgtaccctggcggctcctcctct
tcttcgtcttcctccaccaccggtctcggtccccagcgtcggcccgatgcgtcccagctg
ccccctgcccggcctggcgagttcagggagtgttactacagcaccggggagcagagctcg
tgcagcatcctggcccgcaacaccacccagcaggagtgctgctgcaccgtgggccagggc
tggggcatgggctgccagtacgacccctgtcctccgctaggcacagccgagcaccaggcg
ttgtgccccagcggacgaggatatgttaccgggccaggagcatttagctacaaagatgtg
gatgagtgtaagctgttccaccctgaggtgtgtaagagcggtgtatgtgtcaacaacatc
cctggctactcctgctactgcaccattggctactactacgacgacgtgtttctggagtgc
atcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgcgtcaac
atattaggctcacacttctgtacctgcgagcctcctcttgtgttggacgacactcagcgc
agctgtgtcaattccactgacctcgccgtggatgagaacctatcgttctgctggcagttt
gtcacagcagacctggtgtgtcagagccccctgctgggtggacaggtcaccttcactgag
tgctgctgtctgtatggagagggctggggactgcattgtgctctgtgtcctgccagagac
tcagaggactatgaggctcgctgtaacgtcttcctggggcccccagagtttcctcccccc
ttccctgacccctacgggccggacccagggccaggacccggcagaggaggagagggagga
ggaggagtggggtatcgcgtgcccaatggaccggactccttcccagaccccatcccccgc
aggcctgagtacccccagcctgactatgacgactacacaccagcgggaggcagcaggtct
ggcttcagaagcagaacgcccagcaccttcagcgtcccagagagcccatacagacggccc
tcaggatacattcctgagcggtactatgacgaggacgactacggcccgcctgacgctcct
ccgagaccccatttccggaccctcccagaccctcgttctgagcttgcctttggggtgcga
ccccctccccccatccgagagggcctccctctgagtctggcccccctctcggacagtgac
ccctacagtgaggaggaggaggaggaggaggaggggccagaaccctggcgtgtgggaccc
cctttccctccgttccctgacagacaggggccaggtggtggtggtggcccacggagagtc
tatgagagacgatatgagccgtatgcaggcctgagcacagaggactgtgggatactgcac
ggctgtgagaacggcaggtgtatccgggtggcggagggatacacgtgtgactgctacgag
ggctacgagctggacatgacctccatggcctgcatagacatcaatgagtgtgtggatcct
gacaacgcgtgtgcgaacggccgatgcatcgacacagacggctcctatcgttgtgtgtgc
caccggggctacgtcatgtcccggaggcccaaccactgtgtggcagcataa
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