Oncorhynchus nerka (sockeye salmon): 115137078
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Entry
115137078 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115137078
09142 Cell motility
04810 Regulation of actin cytoskeleton
115137078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115137078
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115137078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
GTP_EFTU
Cdh1_DBD_1
NOG1
FF
Motif
Other DBs
NCBI-GeneID:
115137078
NCBI-ProteinID:
XP_029528970
LinkDB
All DBs
Position
LG11:complement(24397648..24477696)
Genome browser
AA seq
1538 aa
AA seq
DB search
MMAKKQDAKAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTS
DFGGRVVNNDHFLFWGETGRVLEEGPECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
SNKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLMVDGFLLCVDVSRGMNRNFDEQMKFI
TNLYNQLAKNKKPVVLVLTKCDEGVERYIKDSHTFALAKKNLQVVETSARSNVNVDLAFL
TLVQLIDKGRGKPKIIPYFEALKQQSQQIASAKDHYEWQVSRIVKNHNETWPNINRRMQT
SPEYKEYVFLEGTAKAKKLFQQHVHRLKQEHIERRRKVYLSTLPQALVSLVPELDEIDHL
SWSGVQKVLETKRDFSQWFVVLDDTPWETTPHIDNMEDERIPEDLLETPVAETIYESHLE
HLRNERKKTEMKWEFKEKLSASPFITAGKPWEEARSFIMNEDFYQWLEEQEYLDIYNRHQ
KEIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAERD
ALVLKHIHFVYHPTKETCPNSPHCVDCKIEQVLASKFPTRYSFFDSHKPGDGNADRINLV
ILGKDGLGRELANEIRALCTNDDRYVLDGKMYELSLRPIEGNVRLPVNSFHTPTFTPHGV
LCLYNSKESLSYIVESIEKLRESTLGRRENSLFQLPMNLLLVTKRGVGSVRDIGGETAHT
LILQGQQVAGKLQCGYLDPASPGVGYGRNVNEKQINQVLKGLLECRRPPGSIGSSSPPLP
PSFRDSHSQPIPETDLRIVMCLMCGDDYDVEQLLSPLLLPQHCRPASSLSSGTSVLLELT
VGAQRHTIDLSLLSFHSSFALRKSRLVHGYIAVYSARRKASMETLCAFLCEVQDIIPVQL
LAVGESQAELSDSEVAREQVSQGEELAREIEARFNTVVCGPGGVVGGLHRIDLFQPFLKE
VVEKRTIVEATHMYDNVAEACTTESMSPARCNSPSPINTLLDSEEDVEPSPPYPDGTPTS
HLGGFKLPDLESSDAFSVISEISTFESKLNNKVPPQVRPKPPVRKVNLGPYMDQQGTNRR
SLPPAVTWAPGSDGGYDPSDYAEPVDAVIKQRPTEEESIYSVPHDSTQGKIITIRNANKH
SNGGGNGSDSEADSSSLERRRKMSALGVKPRLYRDRSKRLGKFSSFRTSFSIGSDDELGP
PKAPEELGGAHKGDNSINEEGEDPKRRNILRSLRRNTKKPRPKPRHSVSKVESNYFGVPL
ANVVTPDRPIPLFIDKCIRYIEATGITTEGIYRVSGNKSEMESMQRQFDQDHNLDLVEKD
FTINTVAGAMKAFFSELPEPLVPYSHQIELVEAFKLNDRDQRVHAMKDILRRFPRENYDV
FKYVINHLNKVSQNNRLNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIESFIHQ
CAFFFYNQPLSDTPSGHASPTATLSSHGGTSAYSSLAYSSPSLTPSPAPYVMPATPPVIP
HYGPPHTQMSPPHTPQSPIQALLPPLHPHHPPTEQHML
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaagcaagacgcaaaggcgcccacctacaacctggtcgtggtgggcctg
tccggcacagagaaagagaaggggcagtgtggcgtgggcaagtcctgcctgtgcaaccgc
ttcgtccgtcccagcgcagacgacttttacctggaccacacctctgtgctaagcaccagc
gacttcggaggacgcgtggtgaacaatgaccacttcctgttctggggggaaacggggcgg
gtgctggaggaagggccggagtgcaggatgcatgtggtggaacagacagagttcattgat
gaccagacgttccagccgcaccgttccacagccctccagccctacatcaagagggcagct
tccaacaagctggcctcggcagaaaagctgatgtacttctgtacagaccagcttgggctg
gagcaggactttgaacagaagcagatgcctgaggggaagctgatggtggatggcttcctc
ctctgtgtggacgtcagcaggggcatgaaccgcaactttgacgaacagatgaagttcatc
actaatctctacaaccagctagccaagaacaagaagccagtggttctggtgctcaccaag
tgcgacgagggggtggagcgctacatcaaggactcgcacaccttcgccctggccaagaag
aacctccaggtggtggagacgtcagcacgctccaacgtcaacgtagacctggccttcctc
accctggtgcagctgatagacaagggccggggcaaacccaagatcatcccctactttgag
gccctgaagcagcagagccagcagatcgcctcggctaaagaccactacgaatggcaggtc
agccgcatcgtgaagaaccacaatgagacgtggcccaacataaaccggcgcatgcagacc
tccccagagtacaaggagtatgtcttcctggagggcacggccaaagccaagaagctcttc
cagcagcacgtccacaggctcaaacaggagcacattgagcgaaggcggaaggtctatctc
agcaccctgcctcaggcactggtttccctagtccctgagctggatgagatcgaccacttg
agctggtccggggtccagaaggttctggagaccaagcgggacttctcccaatggttcgtt
gtgttggacgacaccccctgggagaccacgccacacatagacaacatggaggacgagagg
attccagaggatctcctggagacccctgtggccgagacgatttatgagagccacctggag
cacctgagaaacgagcgcaaaaagacggagatgaagtgggagttcaaggagaagctcagt
gcctctccctttatcacagcaggcaagccctgggaggaggcacgcagcttcatcatgaat
gaagacttctaccagtggctcgaggaacaagagtacctagacatctacaacaggcaccag
aaggagatcatcgaccgagccaaggaggacttccaggagctgctgctggagtactcagag
ctcttctatgagctggaggtagacgccaagccaagtaaggagaagatgggggccatccag
gaggtgttgggggaggagcagaggttcaaggccctgcagaagttacaggcagagagggac
gctttggttctcaagcatatccactttgtctaccaccccaccaaggagacctgcccaaat
agcccccactgtgtggactgtaagatcgaacaggttctagcctccaagttccccacacga
tactccttctttgatagccataaaccgggtgatgggaatgcagatcggattaacctggtc
attctgggtaaagacggcctgggtagagaactggccaatgagatcagggctttgtgcact
aatgacgaccggtacgtgctggatgggaaaatgtatgagttgtccctccggcccatagag
ggcaacgttcggctgccggtcaattccttccacacgcctaccttcaccccccatggcgtc
ctgtgtctctacaactctaaggagtcactatcctacattgtggagagcattgaaaagctc
agagagtctacgctaggccgaagggaaaacagtctatttcagctgcccatgaacctgctc
ctagtcaccaaacggggagtagggtccgtcagggacattgggggggagactgcccacaca
cttatcctccaggggcagcaggtggctgggaagctacagtgtggttacctagaccccgcc
tcccctggggtgggctatggacgcaatgtgaacgaaaagcagatcaaccaggtgttaaaa
ggtctgttagaatgccgtaggccccctgggagcataggcagcagctcccctcctttaccc
ccttccttcagagactctcactcccagcccatccccgagacagacctgcggatagtcatg
tgcctgatgtgtggggacgattatgacgtggagcagctcctctcgcctctcctgctgccc
cagcactgtcggccggcctccagcctgagcagtggcacgtccgtgctcctagagctcacg
gtgggggctcagaggcacaccatcgacctctccctgctctccttccactcctcatttgcc
ctacggaagagccggctggtgcacggctacatcgccgtgtattcggccaggcgcaaggca
tccatggagaccttgtgtgcgttcctgtgcgaggtgcaggacatcatccccgtgcagctg
ctggcggtgggggagagtcaggctgagctgtcggactctgaagtggccagggagcaggtg
agccagggggaggagctggcccgggagatcgaggccaggtttaacacagtagtgtgtggg
cctggaggggtagtgggaggcctgcacaggatagacctcttccagcccttcctgaaggag
gttgtggagaaacgcaccatagtggaggccacacacatgtacgataatgtagcagaggcc
tgcaccactgagagcatgagcccggcccgctgcaattcccccagccccatcaacaccctg
ctagactctgaggaggatgtggagccctcgcccccctaccccgatggtacacccacctcc
cacctggggggtttcaagctccctgacctggagtccagcgacgccttctcagtcatctcc
gagatcagcaccttcgagagcaagctcaacaacaaggtgcccccgcaggtacggcccaag
ccccctgtacggaaagtcaacctggggccctacatggaccagcaagggaccaaccgccgc
tctttaccgcctgctgtcacctgggcgccgggcagcgacggtggctacgacccctcggac
tacgccgaacccgtggatgccgtgatcaaacagcggcccacggaggaggagagcatctac
tcggtgccccacgacagcactcagggcaagatcataaccatccgcaacgccaacaagcat
tctaacggcgggggcaatggctcggatagcgaggctgacagcagctccctggagcggagg
cggaagatgtctgctctgggggtgaagccgcggctgtaccgcgaccgctcgaaacgcctg
ggcaagttcagcagcttccgcactagcttctctatcggcagtgacgacgagctggggcca
cccaaggcaccagaggagctgggcggggcgcacaagggggacaactctattaacgaggag
ggtgaggaccccaagaggaggaacatcctcaggagcctgcgcagaaacaccaagaaaccg
cggcccaagcccaggcactccgtatccaaagtagaaagcaactactttggcgtgccattg
gccaacgtggtgacacctgaccgacccatcccgctcttcatcgacaagtgcatccgatat
attgaggcaacaggtatcactactgaagggatctacagggtgagtgggaacaagtcagaa
atggagagcatgcagaggcagtttgaccaggaccataacctggacctggtggagaaggac
ttcaccatcaacacggtggctggggccatgaaggccttcttctctgagcttcctgaaccc
ctggtgccctacagccatcagattgaactggtggaggccttcaagctcaacgacagggat
cagcgggttcacgccatgaaggacatcctgcgccgtttccccagggaaaactatgacgtc
ttcaaatacgtcatcaatcacttgaacaaggtgagccagaataaccgtttgaacctgatg
accagtgagaatctgtccatctgtttttggcccactctgatgcggcccgacttcacaaca
atggacgccctgacggccacgcggacctaccagacaatcatcgagtccttcatccaccag
tgtgctttcttcttctacaatcagcccctgtctgacacccctagcgggcacgcctccccc
accgccaccctctcctcccacgggggaacctcggcctactcctccttggcctacagctct
ccgtccctcacaccctccccggccccttacgttatgcccgccacaccgcccgtcatcccc
cactacgggccgccccatacccagatgtccccgccacacaccccccagtcccccatccag
gccctgctgccccccctgcacccccatcacccccccacggaacaacacatgctgtga
DBGET
integrated database retrieval system
