Oncorhynchus nerka (sockeye salmon): 115137080
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Entry
115137080 CDS
T07952
Name
(RefSeq) ras-related protein Rab-4B-like
KO
K07880
Ras-related protein Rab-4B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115137080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115137080
04031 GTP-binding proteins [BR:
one04031
]
115137080
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
115137080
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115137080
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
115137080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
AAA_7
SRPRB
Septin
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
115137080
NCBI-ProteinID:
XP_029528974
LinkDB
All DBs
Position
LG11:complement(24489013..24505349)
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AA seq
213 aa
AA seq
DB search
MSETYDFLFKFLVIGSAGAGKSCLLHQFIETKFKQDSNHTIGVEFGSRVVSVGGKTVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTDWLTDARMLASPNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKTARTILNKIESGELDP
ERMGSGIQYGDSSLRQLRQPRGTTAQTKQQCNC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacatacgacttcctgtttaagttcctggtcattggaagtgctggggcaggg
aaatcttgcctcctgcaccagttcattgagaccaagttcaagcaggactccaaccacacc
atcggggtcgagtttgggtccagggtggtcagcgtcgggggtaagacggttaaactacag
atctgggacacagccggacaggagcgcttcaggtctgtgactcgtagctactaccgcgga
gcggcaggggcgctgctcgtctatgacatcacaagccgggagacgtacaacgccctgacc
gactggctgacagacgcacggatgctggccagccccaacatcgtcatcatcctgtgcggc
aataagaaggacctggacgcggaccgagaggtcaccttcctcgaggcgtcccgcttcgca
caggagaacgaactgatgttcctggagactagcgctctgacaggggagaatgtggaggag
gccttcctcaaaaccgcccgtaccatcctcaacaagatagagtcaggtgagttggaccca
gaacggatgggttcaggtatccagtatggagattcttctctgaggcagctgagacagccc
agaggtaccaccgcacagaccaagcagcagtgtaactgctag
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