Oncorhynchus nerka (sockeye salmon): 115137170
Help
Entry
115137170 CDS
T07952
Name
(RefSeq) ATP-binding cassette sub-family F member 3-like
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
one03012
]
115137170
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115137170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
nSTAND_NTPase5
AAA
MMR_HSR1
NACHT
AAA_15
AAA_16
AAA_28
DUF1672
ATP-synt_ab
ORC-CDC6-like
DUF87
AAA_23
Dynamin_N
TXNDC16_3rd
Motif
Other DBs
NCBI-GeneID:
115137170
NCBI-ProteinID:
XP_029529154
LinkDB
All DBs
Position
LG11:28500062..28527864
Genome browser
AA seq
711 aa
AA seq
DB search
MATYVDILKSEFPEIDTEVFEYITGVLDCGGVEFEDGEEVYDAIGGLLQGSSADCKNEDD
IRDICQQMFNTLKLSNGHAASKQVLLDAPVRLSQISAECVSVTNDVQGIWMMKRGQNTTV
DARKLEKAEAKLKQKQGRRNERDSQKTTNPLVLEEASASQASSKKDSRVDLSGKNRSYDI
RIENFDVSFGERSLLQGAELSLSTGRRYGLIGRNGLGKTTLLKMLASRSLRVPAHITILH
VEQEVAGDDTGALQSVLESDTVREGLLTEERLLNARIANGTAEGMETVRLSEIYAKLEEI
EADKAPARASIILCGLGFSPKMQTQTTKEFSGGWRMRLALARALFAKPDLLLLDEPTNML
DVRAILWLENYLQTWQTTILVVSHDRNFLNAVVTDIIHLHSQRLESYRGDYENFVKTKED
RLKNQQREYEAQFQYREHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPLEKETEVTL
KFPDNFEKLSPPVLQLDEVEFYYNTDQRLFTQLSVSADLESRICIVGENGAGKSTMLKLL
MGELTPVNGIRHAHRNLKIGYFSQHHVDQLDLNVCSIELLLNKFPGRNEEEYRHQLGGYG
ITGELATRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKALNKFKG
GVVLVSHDERLIRMVCRELWVCEHGNVRRVEGGFDEYRDILQEQFRKEGYL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatacgtggatattctgaagagcgagtttcccgaaattgacaccgaagtgttc
gaatatatcacgggtgtgttggactgtggaggggtggagtttgaggatggagaggaggtg
tatgatgcgattggagggctgttgcaggggtcgtcggctgactgtaaaaacgaggatgac
attcgggacatctgtcagcagatgttcaacactcttaaactgagtaacggccatgccgct
tcaaagcaagtgctgctcgacgctccggtgcggttgtctcagatatctgcagagtgtgta
tctgtcactaacgatgtccaagggatctggatgatgaagaggggccagaatacaactgtg
gacgcgaggaagctagagaaggccgaagccaagctgaagcaaaaacaagggagaaggaat
gaacgggattcgcaaaaaacgactaatccactggtactggaggaggcatcagccagccag
gccagtagcaagaaagacagtcgcgtcgacttgtccgggaagaatcgcagctacgatatt
cgcatcgagaactttgatgtgtcgtttggcgagaggtctttgctgcagggggcagagctg
tctctgtcaacaggtcgccgctatggcctgattggccgcaacggcctggggaagaccacg
ctgctaaagatgctggcgagccgcagcctgcgtgtccctgcccacatcacaatcctgcac
gtggagcaggaggtcgctggagacgacactggggcacttcagagcgtgctggagagcgac
acggtccgggagggtctcctgacagaggaacgcctgctcaatgcgcgcatagccaacgga
actgctgaaggaatggaaactgttcgactgtcggagatctatgctaaactggaggagatt
gaagcagacaaggcacctgcccgagcttcaatcatcctatgtggtttaggtttttctcct
aaaatgcaaacgcagacaaccaaggagttttctggaggctggaggatgagattagctctg
gctagagctctctttgccaagcctgatcttttgttacttgacgagcccaccaacatgttg
gatgtccgagccattctttggctggagaattacctgcagacctggcagaccaccatcctg
gtggtgtcccacgaccggaacttcctcaacgccgtggtgactgacatcatccacctgcac
tcgcagcggctggagagttaccgcggcgactacgagaactttgtcaagaccaaagaggac
cgcctgaagaaccagcagagggagtacgaggcccagtttcagtacagagagcacatccag
gtgtttatcgaccggttcagatacaacgccaacagagcggcacaggtgcagagcaaactg
aagctcttagaaaaactgcctgaactcaaacctctggagaaggaaaccgaagtcacctta
aagttccctgataactttgagaagctgtctcccccggtgctccagttggatgaggtggag
ttctactataacactgaccagcgcctcttcacacagctgtctgtgtctgcagacctggag
tctcgcatctgcatcgtgggtgagaacggggcgggtaaatccaccatgctcaagctactg
atgggagagttaacgcctgtcaacggcatcagacatgcccatcggaacctgaagatcggt
tatttcagtcagcaccacgtggatcaactggacctcaatgtgtgttcaattgagctgcta
ctcaacaaattcccaggtcgtaacgaggaggagtacaggcaccaactgggtggctatggg
ataaccggtgagctggcaactcggccggtggccagtctgtcaggagggcagaagagccgg
gtggccttcgctcagatgaccatgccttgcccaaacttctatatccttgacgagccgacc
aatcacctggacatggaaacgatcgaggcgctagcgaaggcgctcaacaaattcaaaggt
ggggtggtccttgtctctcacgacgagcgtctgatccggatggtgtgcagagagctgtgg
gtctgtgagcacgggaacgtgcggcgagtggaggggggctttgacgagtaccgggatatc
ttgcaggaacagttccgcaaggagggctacctgtga
DBGET
integrated database retrieval system
