Oncorhynchus nerka (sockeye salmon): 115137194
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Entry
115137194 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169-like
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115137194
03400 DNA repair and recombination proteins [BR:
one03400
]
115137194
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115137194
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115137194
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
115137194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_10
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115137194
NCBI-ProteinID:
XP_029529201
LinkDB
All DBs
Position
LG11:30185751..30196745
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AA seq
658 aa
AA seq
DB search
MKMAATESVRSTSRLGHKCKARPADMLKTRTHSQLLTLEEAMCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNIELWEMVRQSYPQRCKMRME
QRDCETGGEDIFRSPAQVSKSGEIRLEYGKQKVPINEEKEEGRRKVHHREGCGTLKHFQD
PFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLHTNVVQRSQSCTDPEEGRRKMRVST
HLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQE
RSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLERPTSY
EASPTILQKWKQIEVDRQSVKVTSKGTLTNPMNEDLVFKPSPIEEKDGKPCSCAPAANKG
KEHLVMCAKTDFSGQENERTCIHNKRRLIFDQAIGETGFHQKQFTTFQTPFVALTSEETV
KECGVSFKSVVVPELHCGPTSIHQNPTVVPHDINASVRSCKLKSKDSQDQRKEFDNRNCA
QNQPTSRRGKKRSQKTKHLEETESGLKRPRSQSQDGCNIECAQAELYIQQVQQEREDREL
AFNLQRQFDREQQQEDKQKTSPDKYFLRSCMSSENRIKCNPRRSGRISKKNEHFNCYY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacagagtctgtcagatccaccagtagattggggcacaaatgcaaa
gccaggcccgccgatatgctgaaaactcggacacattcacagctgctaaccttggaggag
gcaatgtgtccggtttgttcggaaattttattagagcccgtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggacagttgaattcaccagtttgtgctgtcccctc
tgccggctgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaac
atcgaactctgggaaatggttcgacagagttacccacaacgatgcaagatgagaatggag
cagagagactgtgagacgggtggagaagacattttccgctcgcctgctcaggtatccaaa
tctggagagatccgactggagtatggaaagcaaaaagtcccaatcaatgaagagaaagaa
gaggggaggaggaaagtccaccacagagagggatgtggaactctcaagcactttcaagat
cctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaaccaga
aatgtgtctgcatttgttagaagaacaaagatctcagctggtctacataccaatgtggtg
cagagaagccagagctgtactgatccagaagagggaaggcgaaaaatgagggtatctact
catcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatccttctg
tcctctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcatagc
tggcgaggcgtcatcatggcatcatcaacaccttttatggtcccccagtcgaaacaagag
aggtccattagccctgagagcaatgacagtatttctgaggagctgaatcacttcaagcca
atagtgtgttcgccgtgcaccccaccaaagcgactacctgacgggcgagtgatggaaccc
acaattgtgaagtccaccccccggaacttattccgcagcctggaaaggcccaccagctat
gaagcgagccctactatcctccagaaatggaagcagatagaggtggaccgtcagtctgtc
aaagtgacctcgaagggtaccttgaccaaccccatgaacgaggaccttgtcttcaaacca
agccccatagaggagaaggacggcaagccctgtagctgcgctccagcagcaaataaggga
aaagaacacttggttatgtgtgccaagactgatttctctgggcaagagaatgaaagaact
tgtatacataataaacgaagactgatatttgatcaggccattggagagacaggcttccat
caaaaacaattcacaacgtttcaaactccatttgtagccttaaccagtgaggagactgta
aaagaatgtggggtttcttttaagtctgtggtggtacctgaattacattgtggaccaact
tcaattcatcaaaatccaaccgtagtaccacatgatataaatgccagtgttaggagttgc
aaacttaaatcaaaagactcacaggatcagagaaaagagtttgacaatagaaactgtgcc
cagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctggaa
gagacagagtctggactcaagaggccaagatcccagagccaagatggttgcaatatagag
tgtgcgcaggctgaactgtacattcaacaggttcagcaagagagagaggacagagagcta
gcgtttaatcttcaaagacagtttgacagggaacagcaacaagaagacaagcaaaagacc
agtcctgacaagtactttctccggtcctgcatgtccagtgaaaacagaatcaaatgcaat
ccacgcagatcaggaagaatttccaaaaagaatgagcactttaattgctattattaa
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integrated database retrieval system
