Oncorhynchus nerka (sockeye salmon): 115137196
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Entry
115137196 CDS
T07952
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115137196
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115137196
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
LRRNT
Ig_C17orf99
Ig_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115137196
NCBI-ProteinID:
XP_029529207
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All DBs
Position
LG2:28148560..28161254
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AA seq
720 aa
AA seq
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MARGRFIYCLLGQLLAGLILASVGLSSIQRDNECPQLCVCEIRPWFTPQSTYREATTVDC
NDLRLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLFNLTELDLSQNNFSSIHDVGLTNM
SQLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINIISPNALSGLHNLLRLHLNSNR
LKAIDSRWFESTPNLEILMIGENPVVGILDFNFKPLVNLRSLVLAGMDLTDVPGNAFVGL
DNLESLSFYDNKLIRVPQNALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMG
ELVSVDRFAVDNLPELTKLEATNNPKFSYVNRQAFRDVPALESLMLNNNALNALYQSTVD
SLPNLREISIHSNPLRCDCVIQWMSSNKTSIRFMEPLSMFCALPVEVRGQHVRELFQQDS
AEQCLPMISHDSFPNHLNLDIGMTVDLDCRAMSQPEPDIYWVTPVGNKVMVETLSDKYSL
SSEGTLRISQIQVEDSGRYTCVAQNAEGADTRVTAIRVNGTLLDSTQLMKVYVKKTESHS
ILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTEYEVCLTV
SNIHQQTQKSCVNVTTKHAAFTVEISDQGTNTALAAVMGTIFGIISLASMAVYISKRWKR
KNYNHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKEVSSSSETKPGQVDTTRSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctagagggagattcatctactgtctactagggcagttgttggctggcctgattctg
gcatccgttggtctatcctccatccagagagataatgagtgtccccagctgtgtgtgtgt
gagatccgaccctggttcaccccccaatccacctacagagaagccacgacggtggactgt
aacgacctccgtctcacacgcattccaggcaacttgtccagcgacactcaggtgctcctc
ctgcagagcaattacatcgccagaaccagtgaagagctggagcagctcttcaacctgacc
gagctggacctgtctcagaacaacttcagcagcatccacgatgtgggcctcaccaacatg
tcccagctcaccacactgcaccttgaggagaaccagattactgaaatgcctgactactgc
ctacaggacctcagcaacctgcaagagctctacatcaaccataaccagatcaacataatc
tccccaaacgccctctctggtctgcacaatctgctcaggctccatctcaactccaacagg
ctcaaggccattgacagtcgctggtttgagtcaacgcccaaccttgagatcctcatgatc
ggggaaaatcctgttgttggcatcctggactttaacttcaagccgcttgtaaacctgagg
agcttggttctggctggaatggatttaacagacgtccctggaaatgcctttgtgggacta
gacaacctagagagtctctccttctacgacaataagctaattagagttcctcagaatgcc
cttcagaaactacctaacctcaagttcttggacttgaacaaaaaccctgtgcacaaaatc
caagagggggactttaagaacatgctgaggctgaaagagctgggcataaacaacatgggg
gagctggtctccgttgaccgctttgccgtcgataacctccctgagcttaccaagctggag
gctactaataaccccaaattttcctacgtgaaccgccaggctttccgtgacgtccctgcc
ctggagagcctcatgttgaacaacaatgcccttaacgccctctaccagtccactgtggac
tccctgcccaacttgcgtgagatcagcatccacagcaaccccctgcgatgtgactgcgtc
atccagtggatgagctccaacaagaccagcatccgcttcatggaacccctctccatgttc
tgtgctcttccagtcgaggtcagaggccagcatgtgagggagttgttccagcaggactca
gcagagcagtgcttgcccatgatctcccacgacagctttcccaaccacctgaacctggac
ataggcatgactgtggacctggactgccgtgccatgtcccagcctgagccagatatctac
tgggtcacacctgtagggaacaaggtgatggtggaaaccctgtctgataaatacagcctc
agtagcgagggaacactgcgtatctctcaaatccaggtcgaggactctggcaggtatacc
tgtgtggctcagaatgctgagggggcggacactcgggtgactgctattcgggtgaatggt
actctcttagacagcacccagttgatgaaagtgtacgtgaagaagactgagtcccactcc
attctggtttcctggaaggtcaactccaacgtcatgacctccaacctcaagtggtcatct
gccacaatgaagatagacaaccctcacattacctacacagccagggtcccagtggatgtc
catgagtataacctcacacacctacagccctccaccgagtatgaggtatgtctcaccgtc
tccaacatccaccagcagacacagaagtcctgtgtcaatgtcacaacgaagcacgctgcc
ttcactgtggagatatctgaccaaggcactaacaccgctctcgcagcggtcatgggtacc
atattcggcatcatcagcctggcctctatggctgtgtacatttccaagaggtggaagagg
aaaaactacaatcactccctgaaaaagtacatgcagaaaacatcttccatccccctcaat
gaactctaccctcccctcatcaacctgtgggaggcggacagtgagaaggagaaagaggtt
tcctcctcatcagagaccaaaccaggccaggtggacacaacacggagctactacatgtgg
tga
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