Oncorhynchus nerka (sockeye salmon): 115137251
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Entry
115137251 CDS
T07952
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115137251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115137251
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115137251
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF2207_C
Ion_trans_2
DDHD
Motif
Other DBs
NCBI-GeneID:
115137251
NCBI-ProteinID:
XP_029529319
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Position
LG11:32933431..32943522
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AA seq
710 aa
AA seq
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MISTSSTRPFLAVAPRISPNMATDTEEDSEDEIDETSPGPGRLFNVNNSNNNEEEEKKKK
KKEKKEKKEKKEKASKTCICFLRKKKEKMKQKEQEEKEKEEKEKEEKEKEEKEKKEKEEK
EKKEKEKKEGPKEGFFINPAGSLYYNWLFIITIPVMYNWTMIIARACFEELQHNHLVTWM
ILDYISDVLYLADMAFRTRTAYLEQGLLVKDKKLLLERYISSLQFKLDAISMLPTDVFYI
YLGINYPEIRLNKLLRITRMMEFFTRTETKTNYTNLFRISNLVMYIIIIIHWNACLYYSF
SKSIGFGSDPWVYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFH
VLDFLVGVLIFATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKELELRVITWF
DYLWTNDKAQDERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQ
VFSPGDYICKKGDIGREMYIVKEGKLAVVADDGVKQFCVLGDGSYFGEISILAIKGSKAG
NRRTANIRSIGYSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIP
ETTEIEEKVNRMYSTLELMQTKLKKLLGDYSTSQRATRERIAEIERLTGEVVAEEDLDEE
EKEGGEEEKEGGEEEKKGEEAEKKEGEAEEKKDEEKKEEEEEEEEEEEEK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacatcaagcactcgtccgttcctggcggttgcgcctcgcatttctccaaac
atggccacagacacagaggaggacagtgaggatgaaatagatgaaacctctcctggccca
gggcgtctgttcaatgtgaacaacagtaacaacaatgaggaggaggagaagaaaaagaag
aaaaaggagaagaaagaaaagaaagagaaaaaagaaaaagcttcaaaaacttgtatttgt
tttctcaggaaaaagaaagaaaagatgaagcagaaagagcaggaggagaaagaaaaggag
gagaaagaaaaggaggagaaagaaaaggaggagaaagaaaaaaaggaaaaagaggaaaag
gagaaaaaggagaaagagaaaaaggaggggcccaaagaagggtttttcattaatccagct
ggcagtctgtactacaactggctgttcattatcacaataccagtcatgtacaattggacc
atgataatagccagggcctgctttgaggagctgcagcataatcacctagtcacctggatg
attctggattacatctctgatgtcctctacctggctgacatggccttcaggaccaggaca
gcctacctggagcaaggcctgctggtcaaagacaagaagctgctgttggagcgttatatc
agcagcctccagttcaagctggacgccatctccatgctgcccaccgatgtgttttacatc
tacctggggatcaactaccccgagatccgcctcaacaagctcctccgaatcacgcgtatg
atggagttcttcacccgcaccgagaccaagaccaactacaccaacctcttccgcatctcc
aacctggtcatgtacatcatcatcatcatccactggaacgcctgcctctactactccttc
tctaagtccatcggcttcggctctgacccctgggtctacccggacctgaatgacccagaa
gagccagagttcggggaactggggaggaagtactccttcagcctctactggtccacgctg
acgctgaccaccatcggcgagacgccatcaccggagctggactcagagttcttcttccat
gtgctggacttccttgtgggtgtgcttatcttcgccaccctggtgggcaacatcagctcc
atgatctccaacatcagcgcagcgcgggtcgagtttcaggcacgcatcgacaacatcaag
cagtacatgcagaagtggaaggtggacaaggaactggagctgcgagtcatcacgtggttc
gactacctgtggaccaacgacaaggctcaggacgaaagggagacgctgcggtacctgccc
gacaagctcagggccgaaatcgccattaacgtccacctggatactctcaagaaggtccgc
atcttcgctgactgcgaagcaggcctgcttattgagctggtgctcaagttgcagcctcag
gtcttcagccctggcgactacatctgtaagaagggtgacatcggccgtgagatgtatatt
gtcaaggagggcaagctggcggtggtggctgacgatggcgtcaagcagttctgcgtgctg
ggagacggcagctactttggggagattagtatcctagcgataaagggttctaaggcaggg
aaccggaggacggccaacatccgcagcattggctactcagatctcttctgcctgtccaag
gatgacctgatggagtcattgaccgagtacccggaagccaagggcatgctggaggagaaa
ggtcgtcagatcctgctgaaggacggcctgctggaactggacccttccaaaattatcccc
gaaaccacagaaatcgaggaaaaggtgaaccgcatgtacagcaccctggagttgatgcag
accaagctgaagaagctgctgggagactacagcaccagccagagggcaacgagggaacgc
atcgctgagatagagaggctgactggagaggttgtagcagaggaggacctagatgaggag
gagaaggagggaggggaggaggagaaggagggaggggaggaggagaaaaagggagaggag
gcggagaaaaaggaaggggaggcagaggagaagaaggatgaggagaagaaagaggaggag
gaggaggaggaggaggaggaggaggagaagtag
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