Oncorhynchus nerka (sockeye salmon): 115137259
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Entry
115137259 CDS
T07952
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1-like
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115137259
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRR_EndoS
LRRNT
CAS_CSE1
Sigma_reg_N
HemY_N
EphA2_TM
EIF_2_alpha
Motif
Other DBs
NCBI-GeneID:
115137259
NCBI-ProteinID:
XP_029529324
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Position
LG11:33780281..33784745
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AA seq
527 aa
AA seq
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MDFLLIGLYLKWPLRKPPGLILLLWCSLGIMLKMVPSVEGVCPRLCRCDSKLLYCEGLNL
TDVPRNLSSALGLSMRENNLTELREGHFAGLSQLTWLYLDHNNIDVVEEGTFDRLRRVKE
LDLSTNHIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVP
VRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRT
LYMRNNRATVVVSTLDWTWPFLEKIDLSANEIAYIEPHVFESVPNLKALMLDANRLTAVE
QRILDSWSSLGSITLAGNEWECSRNVCALAQWLSAFRGQRDSQLLCSSPDVAQGEDVLDA
VYAFQLCEDGIDQATTTMGWYPGYTTKDQARGGPTANPYDPPAAEGGAVVTNSFTVTVAN
LDDIDSTMQIHKVVTGTMALIFSFLIVVLMLYVTWKCFPAGVRQVRQCFSSHRRKQKQKQ
SMQQMATMSTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttctaataggcttgtacctaaagtggcccctgaggaagccccctgggttg
atactgttgctgtggtgctctctgggcatcatgctcaaaatggtcccatcggtggagggc
gtctgcccccgtctatgccgctgcgacagcaagctgctctactgcgaggggctcaatctc
accgacgttccacgcaacctgagcagcgcactgggcctgtccatgcgcgagaacaacctg
acggagctgcgcgagggccacttcgctggcctgtcgcaactcacctggctctacttggat
cataacaacatcgacgtggtggaggagggcaccttcgacaggctgcgccgggtcaaggag
ctcgacctgagcaccaaccatatcgagagcctgcccaatggcaccttcaggcccctcccc
aacctgcgcatcctggacctatcgtacaacaggctgcaggcgctggagcccgacctgttc
cacggcctgagaaagctaaccaatttgcatttgcgctacaacgccctcaagtttgtccca
gtgaggatcttccaggactgccggagcatgcagttcctggacctgggctacaaccagctt
cagagcctggcgcggaactccttcgctgggctcttcaagctcacagagctgcacctggag
cacaacgagctggtcaaagtcaacctggcccacttcccccgcctcatctcgctgcgcacg
ctctacatgcgcaacaaccgggctaccgttgtggtcagcaccctggactggacctggccc
ttcctggagaagattgacctgtcggccaatgagatcgcatacatcgagccacacgtcttc
gagagcgtgcccaacctcaaggccctcatgctggacgccaaccggctgacggccgtggag
cagcgcatcctggattcatggtcatccctgggcagcatcactttggcaggcaatgagtgg
gaatgcagccgcaacgtgtgcgccctggcccagtggctgagcgccttccggggccagcgg
gacagccagctactgtgttccagcccggacgtggcacagggcgaggacgtactggacgcc
gtatacgccttccagctgtgcgaggacggcatcgaccaggccaccacgactatgggatgg
taccccgggtacaccaccaaggaccaggcccggggaggccccacggccaacccctacgat
cccccagccgcagagggcggcgcagtggtcaccaattccttcaccgtgaccgtggctaac
ctcgacgacatagacagcaccatgcagatccacaaggtggtgacaggcaccatggcgctc
atcttctccttcctcattgtggtgctgatgctctacgtgacctggaagtgtttcccggcg
ggcgtgcggcaggtgcgccagtgtttcagcagccatcggcgcaagcagaagcagaagcag
agcatgcagcagatggccaccatgtccacgccggagtactacgtcgactacaagcccaac
cacatcgagggggccctggtcatcatcaacgagtacggctcctgcacctgccagcagcag
ccctcccgggagtgtgaggtctga
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