Oncorhynchus nerka (sockeye salmon): 115137329
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Entry
115137329 CDS
T07952
Name
(RefSeq) sorbin and SH3 domain-containing protein 2-like isoform X1
KO
K23708
sorbin and SH3 domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115137329
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
115137329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
115137329
NCBI-ProteinID:
XP_029529463
LinkDB
All DBs
Position
LG11:38042795..38148435
Genome browser
AA seq
1761 aa
AA seq
DB search
MNTDSGGCARSILSHMKRVQSVPNLATGSDSHSSDSDAWRSRSTDGLRNGDDVTSSLAAK
GFRSVRPNLQDKKSPTQAVNQVPLPPPRRESYPSPATGAIPPSYSSLLAETLGPGMLALS
NEKAVLKESYTVKSTSSYSHHQTTTTTSAPQSEPEPNPQPPQTKPQSPLANPIPNDTSKV
KASTATSSTTTQLQAAERKVSSLRLTPVTIPDPPSHQPVSQPETLTTSLPPPNLPPRTDS
SIGPQSQHTASLSVQMAPRNPKPPGSKAPASDHGEGRKVKAPPPVPPLPSAANVVGQAIQ
VAMNGSAPHPQRPSSPPAYPPLPASFSPGVVHMQSRSAEGSESVMSGHTSVSSTVPIARF
SEEEKRVSVIKAPHYEGIGPVDDTGIPIAIRTTVDRPKDWYKTMFKQIHMVHKADDDYAD
SYNATYTVSGDSDTYGQSSNPTVAYPPPRTQTYRPLAKSPSDNGGPGTFREPSPVPPPPP
PKPSLLQLRSRDSDRERDSPDTMNQWGPPDRKVDTRKYRAEPRSIFEYEPGKSSILEQER
PTYKLNPDDIDLENEPWYKFFSELEFGRPPPKKRLDYNPDICPRRLTETSLYFTPTADRV
PERPASAASDYRKRRKSEPSGDQGKNQVSPKPPDPYKGSSTLRKPAIRSSPSSPSRVKGF
LSHSGVTTEKISGGDTCEMTYSPRLSSSPGPYLRSPLAPMPSNLAHRRYDDDANPGGASS
PSSPLKRAICFKNGWQTRRQDAETWSSTEDTPPSPAKLKSRSCDNLLNDRHPGGTGGHKA
TRSESAGSLVFDNPLGQTASSSTRSLPRPHRRRAHDAPGFLKLYRKMHHIDRAQLLPSDV
IRSVRARILELERQPHLFPRKLSPWGPSWGLEVPRDTVPMRISTYEQLIQKSKSMPDLGD
SEVPSGATTPGGSSSRASSSGGGGGGGRETPGYPKRRFSIESLLEEDINNGNGNGTSHHT
FDHHHAHQGARNPPEGQPRLALEPHHRDFPDPLVYRRATVPGAEYSESEQDAAASDLSDF
VQVEGSSFCSESDFDHCSLTSSVESFYGPSSHHHLRHHHSHSHHNSSHQSLGQGQGYQHR
HLISSCKGRCPASNTRFTTMLRHEREQARQELRQKPPQTQQTRHGGRGGSGGDLHALPPS
SQAAQTQQGMSKLAFLISPVPFRRKKGDSPPTSRRSSGGRSTRPKSKEAVYEALDAALRD
IYEHIQAERGRSGARLPDDSILRRLLAEILPDVPERSSSLRGQRGSRKGGPSSSSSYPDG
SPTGYSSSPQLQSPLSTSYSLHTDASNNNDFGEEPGNAEQDASRGYNTTTSDGGGGQTRR
ATPDREVSHKQMTQLILFSLLHQKQPARAIYDFKAQTAKELTFKKGDAVNIIRQIDSNWY
EGEHRGRLGIFPISYIEKMPLPDKQQPIRPPPPAHVREIGEGVARYNFNADTNVELSLRK
GERVVLLRQVDQNWYEGNIPDTTKQGIFPVAYIDIVKRSPSKSPAPSHQPDPHGYPSNRT
QGSTPTKADVYPSRCHSTLCNPAQLEPITLLPPPVSPPSSPSPAFYSASQPADALAMPSS
SPLSHLPTPPPIPLSSSQQIVPPCSPPPTSLISTSYLSSPSPSSPLLTSPPLTTSPLPTS
RPSSTPPPPTPPSSSLLASRQAPVSPPPLQPSSPTSPIADTQQALPSSPPPSSPLPLSPP
LVPFPEPRSPKIKRFVQDLLHGGGDPFQALYNYLPRNEDELELKEGDVVDVMEKCDDGWF
VGTSRRSKQFGTFPGNYVKKL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagacagtggaggatgcgctcgcagcatcctctcccacatgaagcgggtccag
agcgtccccaatctggctacagggagtgattctcactcgtcagattcagatgcatggagg
tcgcgtagcaccgacggcctgaggaacggcgacgacgtcacttcttccctggccgccaag
ggcttccgcagcgtcagacccaacctgcaagacaagaagtcccccacacaggctgtcaat
caggtccccctcccgccccctaggagagagagctacccctcccccgccacaggtgctatc
cccccctcctacagctccctcctagccgagaccctcggacccgggatgctagccctctcc
aacgagaaggccgtcctcaaagagtcttacacagtcaagagcacgtcttcttactcccac
catcagactactaccaccacttctgcaccccaatctgaacccgaacccaacccccagccc
ccacaaacaaaacctcagtctcccctcgccaaccccatccccaatgacaccagcaaggtc
aaagcctccacagctacttcctccaccaccacccagcttcaggctgcagagcgcaaggtg
tcctccctcagactcacccccgtcaccatccctgatcccccctcccaccagcctgtctcc
cagcctgagactctcaccacctcccttcctccccctaaccttcccccacgtacagactcc
tccatcggcccccaaagccagcacacagcctccctctctgtccagatggccccgcggaac
cccaaaccaccaggctccaaggccccagcttctgaccatggggagggcaggaaggtgaag
gccccccctccagttccacctctaccgtctgcagcgaatgtggtgggccaagctattcaa
gtggctatgaatggaagtgcgccccacccccagagaccctcctcacccccggcctacccc
cctctccccgcctcgttcagcccaggggtggttcacatgcagagtcggagcgcagaaggt
tcagagtcggtgatgtcgggccacaccagcgtgagcagcacggtgcccatcgcccgcttt
tcagaggaagagaagagggtgtctgtcatcaaggccccccactacgagggcatcggcccc
gtggatgacacgggcatcccaatcgccattcgcacgacagtggataggccgaaggactgg
tacaagaccatgttcaagcagatccacatggttcacaaagcagatgacgactatgccgac
tcgtacaacgccacatacactgtcagcggtgacagtgacacatatggtcagtcctccaac
cccaccgtggcctaccctccccccaggacacaaacgtaccggcccctggccaagagcccg
tcggacaacggaggccccgggaccttcagggagccctcccccgtgccaccgccacccccg
cccaagccctccctcctacagctgaggtccagagacagcgaccgggagcgagactcgccc
gacaccatgaatcagtggggccctcccgataggaaagtggacactagaaagtaccgcgct
gaacccaggagtatatttgagtacgagcctgggaaatcatccattctggagcaggagagg
ccgacctataagctaaacccagatgacatagatttagagaacgagccttggtataagttc
ttttccgagctggagttcggccgtccgcctcctaaaaaacgtctggattataatccagac
atctgccctcgccgactcacagagacgtcgctgtacttcactcccactgctgaccgggtt
ccagagaggccggcgagtgctgccagtgactacaggaagaggaggaagtcggagccgtca
ggtgaccagggcaagaaccaggtctccccaaaaccaccggacccttacaaaggcagcagc
acactgaggaaacctgccatccgctcctccccctcctccccctccagagtcaaaggtttc
ctctctcatagtggggtgaccacagaaaagattagcggtggggacacgtgcgaaatgacc
tactccccccgtttgagctcttccccgggcccgtacctccgctcccctctcgcccccatg
ccctccaacctcgcccaccgtcgctacgacgacgatgccaacccggggggagcctcttcg
ccctcctcgcccctcaagcgtgccatctgcttcaagaacggctggcagacgcggcggcag
gacgccgagacatggagcagcacagaagacacgccgccctcgcccgcaaagctgaagtcg
cgtagctgcgacaacctgctcaacgacaggcacccagggggcaccggcgggcacaaggct
acccgttcggagagcgccgggtcactggtattcgacaacccattggggcaaaccgcatcg
tcctctactcgctccttgcctcgcccgcaccggcgacgtgcccacgacgcgccaggcttc
ctgaagctctaccgcaagatgcaccacatcgaccgcgcccagctgctaccctctgacgtc
atccgctcggtccgtgcccgcatcctggagctggagcgccagccgcacctcttcccccga
aaactctccccctggggtccgtcgtggggcctggaggttcctcgcgatacggtgccaatg
cgcatctccacgtacgagcaactcatccagaagtccaagtccatgcccgacttgggagat
agcgaggtcccatctggcgcaaccacgcccggcgggtcatcgtcccgcgccagtagtagc
gggggaggaggcggcgggggcagggagacacccgggtaccccaaacgccgtttctccatt
gagtctctgctagaagaagacattaacaatgggaatggtaacgggacgtctcatcacact
tttgaccaccatcacgctcaccagggggcaaggaacccgcccgagggtcagccccgcctc
gctctggaaccccaccaccgcgatttccccgaccccctcgtttatcgacgcgccactgtc
ccgggggccgagtactctgagtcagagcaggatgcagccgcctcggacctcagtgacttt
gtccaagtcgaaggatcctccttctgcagcgagagcgacttcgaccactgctcgctcacc
tcgtcagtcgagagcttctacggcccctcctcccaccaccaccttcgacaccaccacagc
cacagccaccacaactccagtcatcagtctctcggtcagggtcagggctaccagcaccgt
cacctcatcagctcgtgtaaaggacgctgcccggcctccaacacccgctttaccactatg
ctgcgccacgagcgggagcaggcccgccaggagctccggcagaaacccccccagacacag
caaaccagacacgggggaaggggagggagcggaggggacctccatgccctacccccctcg
tcccaagcagcccaaacccagcaggggatgtccaaactggccttcctcatcagtcccgtg
cctttccgaaggaaaaagggtgattctccacccacttcgagaaggagtagtggaggtcga
agtaccaggcccaagtctaaagaagccgtctatgaagctttggatgcggccttgagggat
atctacgaacacatccaagcggagcgaggccggagcggcgctaggctaccagacgatagc
atcctccggaggctactggctgagatcctcccggatgtgcccgagaggagctcctcgttg
cggggacagagggggagccgcaaggggggtccctcctcgagctcctcgtaccccgacggg
agtcccacggggtacagctcgtcaccgcagctacagtcgccgctaagtacctcttacagt
ctccatacagatgcctccaataacaacgactttggagaggagccaggcaacgcagagcag
gatgcctccagggggtacaacacaaccaccagcgatgggggaggggggcagaccagacga
gccaccccggacagagaggtctcccataagcagatgacccaactcattctcttctctctc
ctccatcagaaacagcctgccagagctatatatgactttaaggcacagaccgctaaagag
ctgacgttcaagaagggcgacgcggtcaacatcatcagacagattgacagcaactggtac
gagggggagcaccgcggacgactgggcatcttccccatctcctacatagagaagatgccg
ttgccagataagcagcagccgattaggcctcctccaccagcacacgtcagagagatcggg
gagggggtggcccgttacaacttcaacgctgacacaaacgtggagctgtccctccgcaag
ggtgagagggtagtcttgctgagacaggtggaccagaactggtacgaggggaacatccca
gacaccaccaagcagggcatcttccctgtggcctacatagacatcgtcaaacgctcgccc
tccaagagccccgccccctcccaccagccagacccacacggctaccccagcaacaggaca
cagggctccacgcccaccaaggctgatgtctatccgtcccgctgtcacagcactttgtgc
aacccggcacagttggaacccatcaccctcctccctccccccgtctctcctccctcctca
ccatcccccgctttttactctgcctcacaaccagctgacgccctggctatgccttcttcc
tctccactgtcccatcttcctacccctcccccaattcccctctcctcctcgcaacagatt
gtgccaccctgctctcctccccccacttccctcatctctacctcctacctctcttctcct
tcaccctcttctccccttctcacctctccgcctctcacgacctcacccctccctacctcc
cgcccatcctctactcctcctccccccacccctccctcttcctcccttctggcctcacgt
caagccccggtctcccctcctcctctccaaccctcttctccaacctcccccatcgctgac
acacaacaggcgctcccatcctcccctccaccctcttctcctctccctctctcccctcca
ctcgtaccctttccagaacctaggtctcctaagatcaagaggtttgtgcaggatttgctc
catggtggtggagaccctttccaggccctgtacaactacctgccccgtaacgaggatgag
ctggagctgaaggagggggacgtcgtggacgtcatggagaagtgtgacgacggctggttt
gtcgggacttctcgacggagcaagcagtttggaaccttcccaggaaactacgtcaagaaa
ctataa
DBGET
integrated database retrieval system
