KEGG   Oncorhynchus nerka (sockeye salmon): 115137361
Entry
115137361         CDS       T07952                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells isoform X1
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    115137361 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115137361 (xpa)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115137361 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N RhgB_N Ion_trans_N
Other DBs
NCBI-GeneID: 115137361
NCBI-ProteinID: XP_029529507
LinkDB
Position
LG11:complement(39074513..39081281)
AA seq 283 aa
MLFFAMDLLEPPTPVKDNASSPSESKAKNCDLTPAMRAKIERNRQRALMLRQARLASRPS
AGEGGGTSAKVAKIVDSGGGFFIDEEEEGQEEQRTKEVVHQPAPVMEADYLLCDDCDKPF
MDSYLSNGFDLAVCDNCRDNEVKHKLISRTEAKQLYLLKDCDLDQREPVLRFVLRKNPHN
PHWGDMKLYLKLQVEKRSLEVWGSEEALEEAKEAREENREVQKQKRFNKKVKELRRAVRS
SVWTKDTSAHQHEYGPEEIVDEEEDLYRKVCNTCGHELTYEKM
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcttttttttgcgatggatctgttggagcctcctacgccggtgaaggataatgcttcc
tctccttcggagtccaaagccaagaactgcgatctgaccccagcaatgagagccaagatc
gaacgaaacagacagcgggctctgatgctgaggcaagcccgactggccagcagaccatcg
gcaggggaagggggtggaacctcggctaaagtcgctaaaatagtcgactctggaggaggt
ttcttcattgatgaagaagaggagggacaggaggagcaaaggacaaaggaagtggtgcat
caaccagccccggtgatggaggcagactatctgctgtgtgatgactgtgacaagccgttt
atggattcctaccttagcaacggcttcgatctggcagtctgtgacaactgcagagacaac
gaggtgaaacacaagctgatatcccgtacggaggctaagcagctctacctactgaaggac
tgtgacctggaccagagggagccagtgctgaggtttgtcctgaggaagaacccacacaac
cctcattggggagacatgaaactctacctcaagctgcaggtggagaagcgctccttagag
gtgtggggctctgaggaggccctggaggaggccaaggaggccagagaggagaacagggag
gtgcagaagcagaagcgcttcaacaaaaaggttaaagagctccgccgtgcagtgaggagc
agcgtgtggacaaaggacaccagcgctcaccagcacgagtacggccctgaggagatagtg
gatgaagaggaggatctctacaggaaggtctgtaacacctgtggacacgaactgacctat
gagaagatgtag

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